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hypothetical_protein_1

Euk-Vir

Hubei_sobemo-like_virus_34

hypothetical_protein_1__YP_009330011__Hubei_sobemo-like_virus_34__1923221

Identity

Accession:
YP_009330011 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

55.4 mean pLDDT

Taxonomy

Hubei_sobemo-like_virus_34

TaxID: 1923221

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 199-361
PDB
Domain cluster: rep: uncovered_polypeptide_polyprotein__YP_529550_615-1154__Newbury_agent_1__331642__D396-536
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.78 74.0 6.89e-01 100.0% 84.3%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 43.0 5.50e-01 75.5% 93.1%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 68.0 6.61e-01 98.2% 90.6%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 43.0 5.13e-01 75.5% 83.5%
2kvoA01 2.40.30.220 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 0.52 32.0 3.83e-01 77.9% 94.2%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.51 19.0 2.98e-01 90.2% 89.7%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2710030 1.1.5.12 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S39 0.83 79.0 7.43e-01 100.0% 89.0%
3400042 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 78.0 6.78e-01 100.0% 88.1%
1308507 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 75.0 7.14e-01 100.0% 84.0%
3879232 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.81 77.0 6.25e-01 100.0% 91.6%
3672433 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 74.0 6.00e-01 96.3% 59.3%
3452728 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 77.0 7.02e-01 100.0% 89.3%
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 69.0 6.96e-01 99.4% 90.1%
3880689 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 76.0 6.65e-01 100.0% 88.3%
3493511 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 76.0 6.58e-01 100.0% 76.6%
3403377 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.80 75.0 6.40e-01 100.0% 84.8%
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 74.0 6.10e-01 100.0% 68.4%
3448847 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 74.0 6.09e-01 100.0% 90.5%
3633439 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.78 73.0 6.10e-01 100.0% 79.6%
3611892 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 74.0 6.99e-01 100.0% 87.9%
3433009 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 73.0 6.22e-01 100.0% 71.0%
3464880 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.78 73.0 6.62e-01 100.0% 83.7%
3432441 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.78 74.0 6.22e-01 100.0% 80.0%
4974463 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 71.0 7.12e-01 100.0% 95.1%
3443528 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 73.0 6.61e-01 100.0% 85.1%
4205419 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 73.0 6.44e-01 100.0% 84.8%
3436414 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 73.0 6.66e-01 100.0% 83.8%
3428386 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 73.0 6.22e-01 100.0% 70.8%
5018347 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.77 67.0 6.90e-01 95.1% 94.8%
5023947 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.77 69.0 6.79e-01 100.0% 89.4%
4881914 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 70.0 6.51e-01 97.5% 93.5%
3434538 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 72.0 6.48e-01 100.0% 85.1%
3435448 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 71.0 6.21e-01 100.0% 91.2%
3448106 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.76 71.0 6.09e-01 100.0% 84.0%
3280223 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 71.0 6.67e-01 100.0% 90.8%
3397694 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 70.0 6.16e-01 100.0% 85.5%
3469033 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 71.0 6.03e-01 100.0% 84.0%
260 1.1.5.22 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S32 0.75 61.0 5.65e-01 92.0% 69.2%
3220497 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.75 69.0 6.15e-01 97.5% 84.5%
5037776 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.75 68.0 6.09e-01 96.3% 96.8%
4518211 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.75 71.0 6.75e-01 100.0% 96.2%
4614564 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 67.0 6.29e-01 95.1% 88.7%
3952718 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 70.0 6.71e-01 100.0% 96.2%
3277840 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 69.0 6.37e-01 100.0% 90.7%
3278337 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.73 69.0 6.43e-01 100.0% 94.9%
257 1.1.5.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.73 68.0 6.12e-01 100.0% 80.4%
3416144 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.73 68.0 6.20e-01 100.0% 88.6%
4934715 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 67.0 5.87e-01 98.8% 88.5%
2779726 1.1.17.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.72 68.0 6.45e-01 100.0% 88.2%
4882551 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.71 59.0 6.21e-01 96.3% 95.3%
1147338 1.1.5.5 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.69 56.0 5.98e-01 94.5% 98.6%
4518121 9.7.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › Inh 0.63 28.0 3.48e-01 89.0% 64.0%
3577505 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 24.0 3.14e-01 70.6% 77.6%
4157526 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.52 33.0 3.80e-01 84.7% 88.7%
4222919 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.51 35.0 3.93e-01 84.7% 92.0%
4056039 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.50 33.0 3.82e-01 93.9% 93.0%
D2 medium residues 8-76
PDB