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hypothetical_protein_1
Euk-VirHubei_sobemo-like_virus_16
hypothetical_protein_1__YP_009330045__Hubei_sobemo-like_virus_16__1923201
Identity
- Accession:
- YP_009330045 ↗
- Protein ID:
- hypothetical_protein_1
- Kingdom:
- euk
Quality
60.4
mean pLDDT
Cluster
View cluster (38 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-61
D2
high
residues 273-332
Domain cluster:
rep: hypothetical_protein_1__YP_009329982__Hubei_sobemo-like_virus_9__1923242__D323-372
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2krsA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 48.0 | 4.83e-01 | 88.3% | 73.3% |
| 1x43A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 49.0 | 4.91e-01 | 90.0% | 77.4% |
| 6ghmC02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 49.0 | 4.81e-01 | 90.0% | 75.0% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 47.0 | 3.04e-01 | 76.7% | 18.5% |
| 2pqhB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 47.0 | 4.58e-01 | 90.0% | 70.8% |
| 3n40P02 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.65 | 47.0 | 3.22e-01 | 78.3% | 82.5% |
| 7jw2A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 53.0 | 3.74e-01 | 96.7% | 39.0% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 42.0 | 4.22e-01 | 81.7% | 66.7% |
| 5cmlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 50.0 | 3.42e-01 | 88.3% | 64.2% |
| 7ffnN01 | 2.60.40.3200 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain | 0.64 | 47.0 | 3.33e-01 | 78.3% | 84.0% |
| 3rriA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.64 | 44.0 | 3.46e-01 | 73.3% | 43.5% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 46.0 | 4.47e-01 | 93.3% | 69.1% |
| 1bdp001 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 53.0 | 3.77e-01 | 96.7% | 47.4% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 44.0 | 4.52e-01 | 90.0% | 78.9% |
| 2vgeA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.63 | 46.0 | 3.22e-01 | 90.0% | 23.2% |
| 1okeB02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.63 | 45.0 | 4.21e-01 | 76.7% | 62.3% |
| 4cc2A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 48.0 | 4.77e-01 | 90.0% | 81.0% |
| 1udlA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 45.0 | 3.90e-01 | 91.7% | 48.0% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 4.31e-01 | 75.0% | 98.5% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.62 | 46.0 | 3.88e-01 | 78.3% | 77.6% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.62 | 52.0 | 3.86e-01 | 100.0% | 66.7% |
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.61 | 54.0 | 4.53e-01 | 100.0% | 79.6% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 48.0 | 4.15e-01 | 91.7% | 84.5% |
| 6o5cA02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 47.0 | 4.46e-01 | 88.3% | 69.7% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.00e-01 | 93.3% | 71.0% |
| 3au4A04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 4.20e-01 | 90.0% | 82.8% |
| 1gcqB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 43.0 | 4.37e-01 | 90.0% | 80.7% |
| 3tfmA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 48.0 | 4.19e-01 | 93.3% | 90.9% |
| 2yzsA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.60 | 44.0 | 4.00e-01 | 88.3% | 58.7% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 45.0 | 4.42e-01 | 90.0% | 76.9% |
| 2p6rA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 42.0 | 2.96e-01 | 75.0% | 99.5% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.59 | 42.0 | 4.26e-01 | 85.0% | 76.7% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.59 | 40.0 | 3.39e-01 | 70.0% | 54.7% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 4.17e-01 | 95.0% | 88.0% |
| 2kv1A01 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.59 | 42.0 | 3.83e-01 | 78.3% | 59.3% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.59 | 48.0 | 3.94e-01 | 93.3% | 71.2% |
| 2fhdA02 | 2.30.30.810 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 45.0 | 4.29e-01 | 86.7% | 84.7% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 43.0 | 4.06e-01 | 90.0% | 66.7% |
| 3ghjA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 39.0 | 3.22e-01 | 71.7% | 62.9% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.57 | 42.0 | 3.65e-01 | 78.3% | 79.1% |
| 4c3xA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 48.0 | 2.99e-01 | 98.3% | 73.2% |
| 4cswA02 | 3.40.366.30 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 | 0.56 | 42.0 | 3.04e-01 | 81.7% | 31.8% |
| 1qqgA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 43.0 | 3.78e-01 | 91.7% | 84.5% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 37.0 | 3.23e-01 | 75.0% | 43.2% |
| 4cciA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 39.0 | 2.64e-01 | 76.7% | 67.8% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 3.54e-01 | 95.0% | 59.1% |
| 3fcdB00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 38.0 | 3.14e-01 | 75.0% | 93.3% |
| 3upsA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 38.0 | 3.23e-01 | 75.0% | 67.6% |
| 2i8dA01 | 3.90.1150.200 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.54 | 37.0 | 3.37e-01 | 71.7% | 58.0% |
| 3orjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.21e-01 | 76.7% | 90.7% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 36.0 | 2.83e-01 | 71.7% | 83.8% |
| 4lqbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 37.0 | 2.94e-01 | 75.0% | 43.8% |
| 3bqxA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 36.0 | 2.87e-01 | 73.3% | 59.7% |
| 5ir2A00 | 3.50.30.40 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like | 0.52 | 42.0 | 2.85e-01 | 90.0% | 72.5% |
| 1mukA02 | 3.90.1850.10 | Alpha Beta › Alpha-Beta Complex › RNA-directed RNA polymerase lambda-3 › RNA-directed RNA polymerase lambda-3 | 0.52 | 40.0 | 2.39e-01 | 88.3% | 45.7% |
| 6o1wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.72e-01 | 90.0% | 84.3% |
| 2rbbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 34.0 | 2.77e-01 | 71.7% | 34.9% |
| 2f68X01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 2.70e-01 | 71.7% | 88.4% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 38.0 | 3.20e-01 | 83.3% | 92.7% |
| 2innB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.50 | 42.0 | 2.51e-01 | 96.7% | 19.1% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588521 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.68 | 49.0 | 5.07e-01 | 91.7% | 83.6% |
| 4805775 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 43.0 | 3.21e-01 | 70.0% | 25.5% |
| 3692073 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 47.0 | 4.53e-01 | 90.0% | 65.7% |
| 3265862 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.66 | 55.0 | 3.62e-01 | 98.3% | 50.2% |
| 3566641 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 50.0 | 2.80e-01 | 85.0% | 45.4% |
| 4965868 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.66 | 43.0 | 4.32e-01 | 78.3% | 65.1% |
| 3989362 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.65 | 48.0 | 5.02e-01 | 90.0% | 87.3% |
| 4104114 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.65 | 46.0 | 4.55e-01 | 91.7% | 70.8% |
| 3791186 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 50.0 | 4.63e-01 | 86.7% | 97.5% |
| None | — | 0.64 | 48.0 | 2.74e-01 | 83.3% | 26.3% | |
| 3628059 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 52.0 | 4.18e-01 | 93.3% | 64.8% |
| 3992625 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 52.0 | 4.40e-01 | 93.3% | 66.7% |
| 4940501 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.63 | 41.0 | 4.05e-01 | 78.3% | 61.5% |
| 3621943 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 52.0 | 4.10e-01 | 93.3% | 65.4% |
| 3543889 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 45.0 | 2.76e-01 | 91.7% | 11.2% |
| 3927945 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 51.0 | 4.19e-01 | 93.3% | 67.0% |
| 3250163 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 51.0 | 4.45e-01 | 93.3% | 73.7% |
| 3522910 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.62 | 47.0 | 4.48e-01 | 93.3% | 68.0% |
| 3914833 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 47.0 | 4.50e-01 | 91.7% | 72.9% |
| 3395122 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.61 | 41.0 | 4.41e-01 | 70.0% | 82.0% |
| 3269508 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 52.0 | 4.27e-01 | 98.3% | 73.0% |
| 3250700 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 51.0 | 3.84e-01 | 95.0% | 72.7% |
| 3926600 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 49.0 | 4.12e-01 | 93.3% | 70.0% |
| 3475007 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 48.0 | 4.09e-01 | 93.3% | 70.0% |
| 3991560 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 49.0 | 4.33e-01 | 95.0% | 90.5% |
| 3648930 | 4286.1.1.1 ↗ | beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 | 0.60 | 43.0 | 3.49e-01 | 76.7% | 58.3% |
| 3470251 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 48.0 | 4.09e-01 | 93.3% | 79.1% |
| 3769245 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 44.0 | 4.20e-01 | 90.0% | 66.7% |
| 3500814 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 48.0 | 3.96e-01 | 95.0% | 75.0% |
| 4307219 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.58 | 46.0 | 4.74e-01 | 86.7% | 94.5% |
| 3285508 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 43.0 | 2.39e-01 | 78.3% | 78.7% |
| 4021971 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 44.0 | 3.01e-01 | 81.7% | 30.0% |
| 3226237 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.58 | 41.0 | 2.72e-01 | 73.3% | 25.1% |
| 3920767 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 47.0 | 4.08e-01 | 93.3% | 77.0% |
| 3690448 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.58 | 48.0 | 3.20e-01 | 95.0% | 55.7% |
| 3286447 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 43.0 | 3.08e-01 | 83.3% | 81.0% |
| 3192398 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.57 | 49.0 | 2.90e-01 | 100.0% | 61.4% |
| 3592488 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 48.0 | 3.02e-01 | 96.7% | 98.5% |
| 3271442 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 48.0 | 3.68e-01 | 100.0% | 66.0% |
| 3540167 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 44.0 | 3.55e-01 | 93.3% | 77.8% |
| 4180113 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.56 | 40.0 | 2.94e-01 | 80.0% | 31.1% |
| 4584508 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 41.0 | 2.74e-01 | 80.0% | 20.7% |
| None | — | 0.56 | 45.0 | 2.84e-01 | 95.0% | 74.6% | |
| 4971247 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 38.0 | 3.48e-01 | 71.7% | 58.7% |
| 4877330 | 4246.1.1.2 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_1 | 0.55 | 42.0 | 2.71e-01 | 83.3% | 33.6% |
| 4023722 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 43.0 | 2.66e-01 | 91.7% | 58.7% |
| 4837880 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.54 | 38.0 | 2.90e-01 | 73.3% | 34.8% |
| 4973447 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.54 | 45.0 | 2.75e-01 | 96.7% | 40.7% |
| 3591823 | 59.1.1.4 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Ctf8 | 0.54 | 39.0 | 3.29e-01 | 80.0% | 81.7% |
| 5036641 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.53 | 43.0 | 2.70e-01 | 95.0% | 40.7% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.53 | 36.0 | 3.37e-01 | 71.7% | 61.3% |
| 4952580 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.53 | 46.0 | 3.06e-01 | 98.3% | 73.3% |
| 3271834 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.52 | 42.0 | 2.45e-01 | 98.3% | 22.5% |
| 5028212 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.52 | 35.0 | 2.73e-01 | 70.0% | 28.4% |
| 3275134 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 2.62e-01 | 100.0% | 23.6% |
| 4486407 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.51 | 41.0 | 3.03e-01 | 100.0% | 95.4% |
D3
medium
residues 66-76_98-183
Domain cluster:
rep: hypothetical_protein_1__YP_009329993__Hubei_sobemo-like_virus_6__1923239__D113-207
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.82 | 52.0 | 6.28e-01 | 79.4% | 96.9% |
| 5y2dA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.77 | 58.0 | 5.38e-01 | 88.7% | 64.2% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 60.0 | 6.32e-01 | 88.7% | 94.3% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.75 | 57.0 | 5.89e-01 | 88.7% | 84.8% |
| 1qa7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 62.0 | 5.91e-01 | 88.7% | 81.8% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.74 | 57.0 | 4.41e-01 | 88.7% | 38.9% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 57.0 | 5.95e-01 | 88.7% | 88.8% |
| 5lhrA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 60.0 | 5.63e-01 | 86.6% | 90.6% |
| 1a5iA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.73 | 60.0 | 5.59e-01 | 86.6% | 89.8% |
| 2olgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.73 | 59.0 | 5.37e-01 | 86.6% | 90.7% |
| 2o8mB01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 47.0 | 5.53e-01 | 88.7% | 98.5% |
| 1dleA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 58.0 | 5.28e-01 | 87.6% | 79.1% |
| 1faxA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 57.0 | 5.56e-01 | 86.6% | 87.9% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 58.0 | 5.36e-01 | 88.7% | 69.9% |
| 1l1jA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.70 | 58.0 | 5.40e-01 | 88.7% | 89.0% |
| 2ok5A02 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 56.0 | 4.25e-01 | 85.6% | 45.7% |
| 2bhgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 58.0 | 5.92e-01 | 88.7% | 93.5% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 53.0 | 5.24e-01 | 85.6% | 88.5% |
| 2zu2A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 51.0 | 5.17e-01 | 88.7% | 86.7% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 45.0 | 4.06e-01 | 76.3% | 66.4% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 47.0 | 4.22e-01 | 84.5% | 77.6% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 47.0 | 4.36e-01 | 84.5% | 93.0% |
| 1etb200 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.60 | 46.0 | 4.31e-01 | 80.4% | 80.3% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.59 | 48.0 | 4.26e-01 | 85.6% | 77.8% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 45.0 | 4.23e-01 | 84.5% | 86.5% |
| 2ynaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 48.0 | 4.99e-01 | 87.6% | 100.0% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 47.0 | 4.17e-01 | 87.6% | 89.4% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 45.0 | 4.05e-01 | 84.5% | 92.3% |
| 2wv9A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 46.0 | 3.90e-01 | 89.7% | 93.0% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 45.0 | 4.19e-01 | 86.6% | 94.4% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 45.0 | 4.09e-01 | 85.6% | 80.5% |
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 31.0 | 3.09e-01 | 76.3% | 52.4% |
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 32.0 | 2.97e-01 | 93.8% | 44.1% |
| 5eb9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 4.03e-01 | 88.7% | 100.0% |
| 3jq0A00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 44.0 | 2.88e-01 | 100.0% | 89.3% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 134018 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 58.0 | 4.84e-01 | 88.7% | 44.4% |
| 3409540 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.79 | 66.0 | 4.78e-01 | 88.7% | 39.6% |
| 1308507 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.77 | 60.0 | 4.77e-01 | 88.7% | 42.8% |
| 3235083 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 63.0 | 4.44e-01 | 88.7% | 40.6% |
| 3394133 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 64.0 | 4.76e-01 | 88.7% | 38.2% |
| 3406348 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 63.0 | 4.51e-01 | 88.7% | 39.3% |
| 4338510 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.76 | 60.0 | 4.59e-01 | 88.7% | 38.1% |
| 3407091 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 63.0 | 4.50e-01 | 88.7% | 41.5% |
| 3398355 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 63.0 | 4.55e-01 | 88.7% | 40.8% |
| 3546992 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 63.0 | 4.48e-01 | 88.7% | 40.4% |
| 3408725 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 62.0 | 4.47e-01 | 88.7% | 40.8% |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.74 | 62.0 | 4.71e-01 | 88.7% | 45.1% |
| 3414359 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 62.0 | 4.38e-01 | 88.7% | 36.7% |
| 4148565 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 62.0 | 4.32e-01 | 88.7% | 41.7% |
| 4995689 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.74 | 58.0 | 4.49e-01 | 88.7% | 39.4% |
| 4652006 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 61.0 | 4.37e-01 | 88.7% | 42.3% |
| 3397446 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 63.0 | 4.57e-01 | 90.7% | 47.6% |
| 3401816 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 61.0 | 4.50e-01 | 88.7% | 38.4% |
| 5072499 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.73 | 55.0 | 4.33e-01 | 88.7% | 38.5% |
| 3398044 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 60.0 | 4.33e-01 | 88.7% | 38.7% |
| 3927088 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 59.0 | 4.26e-01 | 88.7% | 39.3% |
| 3399484 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 60.0 | 4.45e-01 | 88.7% | 43.5% |
| 3246192 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.71 | 58.0 | 4.17e-01 | 88.7% | 46.8% |
| 3997886 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 57.0 | 4.28e-01 | 88.7% | 45.3% |
| 3856305 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 56.0 | 4.19e-01 | 88.7% | 41.5% |
| 3234434 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.68 | 56.0 | 4.02e-01 | 88.7% | 40.0% |
| 3838513 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 55.0 | 4.19e-01 | 88.7% | 47.3% |
| 3940726 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.66 | 54.0 | 3.91e-01 | 88.7% | 40.0% |
| 3221539 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.66 | 54.0 | 3.86e-01 | 88.7% | 34.4% |
| 3775960 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.62 | 33.0 | 3.09e-01 | 88.7% | 40.0% |
| 3399135 | 11.1.4.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Transthyretin | 0.61 | 47.0 | 4.56e-01 | 82.5% | 81.5% |
| 3519899 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.60 | 47.0 | 4.18e-01 | 83.5% | 77.1% |
| 4856576 | 11.1.4.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Transthyretin | 0.60 | 46.0 | 4.36e-01 | 80.4% | 81.4% |
| 4494265 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.60 | 48.0 | 4.05e-01 | 85.6% | 76.2% |
| 1883205 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.60 | 44.0 | 4.26e-01 | 78.4% | 97.3% |
| 3928826 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.59 | 47.0 | 4.02e-01 | 85.6% | 66.9% |
| 3584519 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 47.0 | 4.00e-01 | 85.6% | 72.3% |
| 3581700 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 46.0 | 4.11e-01 | 85.6% | 75.7% |
| 3679641 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 42.0 | 3.66e-01 | 76.3% | 90.7% |
| 3598757 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 47.0 | 4.12e-01 | 87.6% | 72.4% |
| 3481202 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 46.0 | 4.02e-01 | 85.6% | 80.7% |
| 3254373 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 46.0 | 4.01e-01 | 85.6% | 71.7% |
| 3907592 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 47.0 | 3.98e-01 | 88.7% | 89.4% |
| 3574658 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.56 | 46.0 | 4.11e-01 | 87.6% | 76.3% |
| 3277382 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.52 | 43.0 | 4.47e-01 | 90.7% | 100.0% |
| 5034351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 29.0 | 3.70e-01 | 77.3% | 96.4% |
| 3747790 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.50 | 22.0 | 2.76e-01 | 71.1% | 61.8% |
D4
medium
residues 77-97_184-269
Domain cluster:
rep: ORF1a__YP_009047079__Human_astrovirus_BF34__1518575__D522-618
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mbmA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.88 | 54.0 | 6.61e-01 | 75.7% | 93.1% |
| 1zyoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.85 | 75.0 | 7.73e-01 | 92.5% | 99.0% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 63.0 | 6.42e-01 | 80.4% | 93.3% |
| 1lvbA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 59.0 | 5.94e-01 | 75.7% | 83.3% |
| 1wczA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 74.0 | 7.21e-01 | 97.2% | 93.0% |
| 1p3cA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.81 | 70.0 | 7.10e-01 | 91.6% | 100.0% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.80 | 54.0 | 6.44e-01 | 76.6% | 100.0% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.80 | 67.0 | 6.94e-01 | 92.5% | 93.1% |
| 1agjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.80 | 66.0 | 6.10e-01 | 87.9% | 90.3% |
| 2rdlA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.78 | 67.0 | 6.50e-01 | 90.7% | 100.0% |
| 1eq9A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.78 | 68.0 | 6.57e-01 | 91.6% | 100.0% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.77 | 61.0 | 5.04e-01 | 83.2% | 96.1% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.76 | 59.0 | 6.13e-01 | 80.4% | 96.0% |
| 2bhgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.76 | 58.0 | 5.97e-01 | 80.4% | 97.1% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 57.0 | 5.80e-01 | 80.4% | 94.3% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.74 | 55.0 | 5.86e-01 | 77.6% | 95.8% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 54.0 | 5.75e-01 | 79.4% | 97.9% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 50.0 | 4.95e-01 | 75.7% | 90.3% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 51.0 | 4.57e-01 | 78.5% | 92.1% |
| 2j5uA02 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.69 | 44.0 | 4.89e-01 | 86.0% | 82.1% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.66 | 39.0 | 4.45e-01 | 78.5% | 78.5% |
| 3ba3B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 49.0 | 4.43e-01 | 78.5% | 97.2% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 46.0 | 4.24e-01 | 73.8% | 89.9% |
| 1kzlA02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 36.0 | 3.68e-01 | 79.4% | 63.4% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3280223 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.84 | 68.0 | 5.39e-01 | 84.1% | 49.7% |
| 2710030 | 1.1.5.12 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S39 | 0.83 | 75.0 | 6.07e-01 | 96.3% | 98.4% |
| None | — | 0.83 | 76.0 | 5.90e-01 | 98.1% | 96.3% | |
| 2526961 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.83 | 77.0 | 5.96e-01 | 100.0% | 95.5% |
| 1096110 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.82 | 75.0 | 5.82e-01 | 97.2% | 96.3% |
| None | — | 0.82 | 75.0 | 5.85e-01 | 97.2% | 96.2% | |
| 5051302 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.82 | 76.0 | 5.84e-01 | 99.1% | 97.8% |
| None | — | 0.82 | 75.0 | 5.82e-01 | 97.2% | 96.3% | |
| 3448847 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.82 | 66.0 | 4.75e-01 | 84.1% | 94.5% |
| 3969197 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.82 | 74.0 | 5.42e-01 | 96.3% | 97.4% |
| 2472950 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.82 | 72.0 | 5.85e-01 | 92.5% | 100.0% |
| 3403377 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.81 | 71.0 | 5.27e-01 | 92.5% | 90.8% |
| None | — | 0.81 | 73.0 | 5.70e-01 | 95.3% | 96.2% | |
| 4247805 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.81 | 71.0 | 5.59e-01 | 93.5% | 93.8% |
| 4387060 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.81 | 73.0 | 5.66e-01 | 95.3% | 94.0% |
| 3464880 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 69.0 | 5.36e-01 | 89.7% | 90.7% |
| 4031177 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 72.0 | 5.57e-01 | 93.5% | 93.0% |
| 3989070 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.81 | 69.0 | 5.36e-01 | 90.7% | 98.6% |
| 3448106 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 65.0 | 4.82e-01 | 84.1% | 87.2% |
| 5037776 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.80 | 65.0 | 4.97e-01 | 84.1% | 46.4% |
| 3672433 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 66.0 | 4.68e-01 | 86.0% | 43.4% |
| 5063379 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.80 | 66.0 | 5.42e-01 | 86.0% | 97.8% |
| 4561917 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.80 | 71.0 | 5.30e-01 | 94.4% | 85.2% |
| 3449628 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.80 | 61.0 | 6.01e-01 | 80.4% | 78.3% |
| 3278337 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.79 | 64.0 | 5.13e-01 | 84.1% | 55.4% |
| 3277840 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.79 | 64.0 | 5.04e-01 | 84.1% | 52.0% |
| 4934715 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.79 | 67.0 | 5.05e-01 | 88.8% | 45.3% |
| 3719164 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 68.0 | 5.50e-01 | 91.6% | 97.4% |
| 3220497 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.78 | 63.0 | 4.89e-01 | 85.0% | 88.6% |
| 3443528 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.78 | 67.0 | 5.26e-01 | 91.6% | 96.7% |
| 3224340 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.78 | 63.0 | 4.72e-01 | 85.0% | 88.6% |
| 3435448 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 64.0 | 4.85e-01 | 86.9% | 96.2% |
| 3236373 | 1.1.5.49 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 | 0.78 | 68.0 | 4.97e-01 | 93.5% | 91.1% |
| 3432441 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.77 | 70.0 | 5.17e-01 | 96.3% | 90.6% |
| 3611892 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.77 | 68.0 | 5.51e-01 | 93.5% | 99.5% |
| 3244773 | 1.1.5.49 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 | 0.77 | 67.0 | 4.96e-01 | 93.5% | 89.2% |
| 3229867 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.76 | 65.0 | 4.80e-01 | 91.6% | 88.8% |
| 3434538 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.75 | 65.0 | 5.09e-01 | 92.5% | 95.8% |
| 134018 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.75 | 59.0 | 5.08e-01 | 83.2% | 94.4% |
| 1826904 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 67.0 | 5.02e-01 | 97.2% | 86.7% |
| 22087 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.74 | 66.0 | 4.95e-01 | 96.3% | 94.3% |
| 2779726 | 1.1.17.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 | 0.71 | 62.0 | 5.08e-01 | 93.5% | 100.0% |
| 3377696 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.70 | 59.0 | 4.75e-01 | 89.7% | 97.0% |
| 1147338 | 1.1.5.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A | 0.70 | 55.0 | 4.98e-01 | 83.2% | 96.5% |
| 3857291 | 206.1.1.13 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Alpha_kinase | 0.68 | 47.0 | 3.57e-01 | 72.0% | 58.4% |
| 3248403 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 59.0 | 5.44e-01 | 100.0% | 97.0% |
| 3615787 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.63 | 58.0 | 4.48e-01 | 100.0% | 80.4% |
| 3598734 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 56.0 | 4.30e-01 | 100.0% | 80.9% |
| 4882551 | 1.1.5.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A | 0.60 | 54.0 | 4.86e-01 | 99.1% | 98.0% |
| 3931783 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.58 | 41.0 | 4.35e-01 | 72.9% | 89.5% |
| 138901 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.58 | 46.0 | 4.27e-01 | 85.0% | 98.5% |
| 3246086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 3.93e-01 | 85.0% | 80.0% |
| 5020339 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.52 | 44.0 | 3.72e-01 | 94.4% | 83.2% |
| 4954241 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.52 | 44.0 | 3.67e-01 | 94.4% | 92.3% |
| 3510388 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 35.0 | 3.41e-01 | 70.1% | 78.2% |
| 3268160 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 3.95e-01 | 82.2% | 88.9% |
| 3626415 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.50 | 35.0 | 3.54e-01 | 85.0% | 72.4% |