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hypothetical_protein_1

Euk-Vir

Hubei_sobemo-like_virus_38

hypothetical_protein_1__YP_009330116__Hubei_sobemo-like_virus_38__1923225

Identity

Accession:
YP_009330116 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

63.3 mean pLDDT

Taxonomy

Hubei_sobemo-like_virus_38

TaxID: 1923225

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 101-256
PDB
Domain cluster: rep: uncovered_polypeptide_polyprotein__YP_529550_615-1154__Newbury_agent_1__331642__D396-536
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.83 79.0 7.16e-01 100.0% 84.7%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.81 76.0 6.97e-01 100.0% 82.8%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 44.0 5.48e-01 72.4% 85.1%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.78 74.0 7.05e-01 100.0% 91.1%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 41.0 5.06e-01 72.4% 80.2%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 43.0 5.01e-01 72.4% 77.4%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 43.0 5.22e-01 72.4% 87.6%
5y2dA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 40.0 4.58e-01 100.0% 70.8%
1lvmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 40.0 4.82e-01 100.0% 81.1%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 41.0 4.56e-01 100.0% 72.4%
1agjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 42.0 4.57e-01 71.2% 72.4%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 38.0 4.87e-01 86.5% 93.5%
3l6pA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 39.0 4.67e-01 100.0% 100.0%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 34.0 3.92e-01 100.0% 80.2%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.54 38.0 4.13e-01 100.0% 88.8%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 22.0 2.90e-01 71.8% 73.8%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1096110 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.87 83.0 7.31e-01 100.0% 83.8%
2526961 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.87 83.0 7.24e-01 100.0% 81.9%
None — 0.87 83.0 7.26e-01 100.0% 83.4%
None — 0.86 82.0 7.20e-01 100.0% 83.7%
3650249 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 81.0 6.82e-01 100.0% 75.9%
None — 0.85 81.0 7.21e-01 100.0% 83.6%
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 81.0 6.54e-01 100.0% 66.5%
4647114 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 6.79e-01 100.0% 77.5%
3452728 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 80.0 7.21e-01 100.0% 87.3%
3448847 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 80.0 6.44e-01 100.0% 90.2%
3816593 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 6.98e-01 100.0% 84.5%
4441614 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 80.0 6.62e-01 100.0% 85.9%
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 75.0 7.48e-01 100.0% 90.7%
398505 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 80.0 6.89e-01 100.0% 80.3%
2472950 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.84 80.0 7.51e-01 100.0% 89.7%
4625374 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 79.0 6.84e-01 100.0% 80.9%
3948218 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.84 80.0 6.69e-01 100.0% 80.8%
3532116 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 79.0 7.02e-01 100.0% 82.3%
4939745 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 79.0 6.94e-01 100.0% 82.7%
5063379 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 79.0 7.51e-01 100.0% 90.6%
5063188 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 79.0 6.99e-01 100.0% 80.9%
4324118 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 79.0 6.67e-01 100.0% 86.3%
3816110 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 79.0 6.84e-01 100.0% 77.8%
4028981 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 78.0 6.88e-01 100.0% 85.5%
1826904 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.83 79.0 6.59e-01 100.0% 73.4%
3989070 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.83 78.0 6.86e-01 100.0% 88.5%
3950281 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.83 78.0 6.79e-01 100.0% 80.9%
2512790 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 6.62e-01 100.0% 73.9%
5072499 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 78.0 7.11e-01 100.0% 83.0%
3447254 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 6.84e-01 100.0% 81.8%
3284072 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 6.62e-01 100.0% 81.2%
4247805 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.82 78.0 6.96e-01 100.0% 83.4%
3415399 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 78.0 6.91e-01 100.0% 80.9%
3436414 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 78.0 6.94e-01 100.0% 82.4%
3462061 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 77.0 6.86e-01 100.0% 82.3%
22087 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.82 78.0 6.55e-01 100.0% 73.5%
1308507 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 76.0 7.13e-01 100.0% 81.8%
22093 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.82 77.0 6.84e-01 100.0% 85.6%
220 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 77.0 6.83e-01 100.0% 85.6%
4387060 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 78.0 6.87e-01 100.0% 82.3%
None — 0.81 77.0 6.90e-01 100.0% 84.8%
3280223 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.81 77.0 7.09e-01 100.0% 89.7%
4031177 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 77.0 6.84e-01 100.0% 82.2%
3425181 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 77.0 6.61e-01 100.0% 79.1%
4221728 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 77.0 6.63e-01 100.0% 77.4%
3428386 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 76.0 6.38e-01 100.0% 69.6%
3672433 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 72.0 5.75e-01 95.5% 56.2%
3417330 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 75.0 6.62e-01 100.0% 81.4%
3443107 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.79 75.0 6.53e-01 100.0% 73.3%
4089092 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.79 74.0 6.37e-01 100.0% 83.0%
4119987 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.79 74.0 6.47e-01 100.0% 85.3%
3408358 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.79 74.0 5.99e-01 100.0% 92.1%
3190386 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 73.0 6.31e-01 100.0% 83.0%
257 1.1.5.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C4 0.78 73.0 6.46e-01 100.0% 76.3%
3420143 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 59.0 5.92e-01 79.5% 89.4%
3262549 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 72.0 6.23e-01 100.0% 81.7%
3739220 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.76 71.0 6.32e-01 100.0% 87.9%
3420315 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.74 69.0 6.33e-01 100.0% 86.0%
3221009 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.71 66.0 6.09e-01 100.0% 91.5%
4056039 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.54 38.0 4.31e-01 89.1% 97.4%
78 1.1.5.25 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.54 38.0 4.13e-01 100.0% 88.8%
D2 medium residues 334-405
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 35.0 3.87e-01 73.6% 57.6%
3vtiA06 3.30.420.560 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.66 43.0 3.77e-01 98.6% 45.7%
1okeB02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.65 43.0 4.21e-01 94.4% 62.3%
6n9aB02 3.30.420.200 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.65 49.0 4.98e-01 86.1% 82.6%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.65 43.0 4.34e-01 95.8% 69.0%
1e3mA01 3.40.1170.10 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I 0.63 52.0 4.34e-01 90.3% 70.7%
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 33.0 3.58e-01 72.2% 59.7%
5ijgA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.62 46.0 3.28e-01 97.2% 26.8%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 54.0 4.85e-01 98.6% 75.5%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 44.0 2.85e-01 95.8% 16.8%
4h59A02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.61 47.0 3.66e-01 86.1% 65.1%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 45.0 2.99e-01 95.8% 19.1%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.60 41.0 4.21e-01 95.8% 73.2%
3fssA01 2.30.29.120 Mainly Beta › Roll › PH-domain like › 0.58 50.0 4.12e-01 98.6% 83.1%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.57 46.0 3.89e-01 87.5% 92.5%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.57 50.0 3.82e-01 100.0% 57.5%
3l4eA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.57 44.0 3.24e-01 94.4% 30.7%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.56 46.0 3.83e-01 93.1% 98.5%
3l6dA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 3.78e-01 100.0% 51.8%
3f2bA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 49.0 3.37e-01 100.0% 43.8%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.55 37.0 2.80e-01 70.8% 82.7%
2hqmA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 48.0 3.42e-01 100.0% 53.1%
3qhaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 3.74e-01 100.0% 52.2%
2uyyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 3.70e-01 100.0% 50.9%
1k0eB00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.55 44.0 2.79e-01 90.3% 73.2%
4e21A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 47.0 3.60e-01 100.0% 47.8%
5je8B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 3.71e-01 100.0% 51.8%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 4.28e-01 100.0% 87.1%
2hpiA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.54 47.0 3.23e-01 100.0% 52.7%
2cvzA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 3.73e-01 100.0% 52.6%
5y8lB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 46.0 3.67e-01 100.0% 53.1%
2a6aB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 42.0 3.67e-01 87.5% 97.5%
4d3dA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 48.0 3.71e-01 100.0% 54.4%
1nrvA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 42.0 3.80e-01 86.1% 73.0%
5g6rA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 3.70e-01 100.0% 55.4%
3n40P02 2.60.40.3200 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain 0.53 44.0 3.25e-01 95.8% 88.0%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 45.0 3.79e-01 94.4% 92.8%
3e38B01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.53 45.0 3.18e-01 97.2% 78.0%
2gf2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 3.63e-01 100.0% 53.7%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 43.0 3.08e-01 91.7% 32.2%
4ncbA05 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 44.0 3.60e-01 97.2% 49.7%
3ws7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 46.0 3.51e-01 100.0% 49.7%
7lnpA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 42.0 2.83e-01 94.4% 93.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 34.0 3.72e-01 100.0% 86.0%
3bs1A00 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.52 45.0 4.06e-01 100.0% 90.3%
6smyB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 45.0 3.63e-01 100.0% 59.7%
4da2A02 3.40.1350.60 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.50 42.0 3.45e-01 100.0% 78.3%
1pgjA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 43.0 3.27e-01 100.0% 50.0%
2hnhA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.50 43.0 2.98e-01 100.0% 67.4%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4053786 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.73 55.0 4.83e-01 80.6% 90.5%
4971800 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.68 55.0 3.54e-01 87.5% 26.2%
3271442 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 45.0 3.57e-01 70.8% 58.7%
4027737 242.3.1.1 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.64 54.0 4.03e-01 90.3% 54.7%
4997554 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.64 49.0 3.79e-01 80.6% 44.7%
4943694 242.3.1.3 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_II 0.62 51.0 4.46e-01 90.3% 78.2%
4404464 242.3.1.1 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.62 52.0 4.50e-01 91.7% 75.5%
3987284 2007.1.14.5 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.61 48.0 3.77e-01 86.1% 69.7%
5047918 7592.1.1.0 ↗ a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.61 45.0 3.77e-01 100.0% 44.6%
3414153 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.61 35.0 3.79e-01 94.4% 68.3%
4026490 242.3.1.1 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.60 53.0 4.31e-01 98.6% 86.7%
4995140 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.59 46.0 3.64e-01 83.3% 47.6%
4976214 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.59 50.0 3.57e-01 91.7% 57.0%
2755269 3708.1.1.1 ↗ a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB 0.59 45.0 4.23e-01 83.3% 78.4%
3925834 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 3.78e-01 91.7% 89.7%
5055179 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.58 50.0 3.56e-01 94.4% 53.3%
4629529 2002.1.1.420 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI, PF25918 0.56 48.0 2.95e-01 93.1% 21.2%
3267918 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 39.0 4.28e-01 93.1% 96.4%
3590785 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.55 49.0 3.39e-01 100.0% 91.4%
3995638 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.55 42.0 3.54e-01 83.3% 69.2%
4969601 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 44.0 3.18e-01 100.0% 28.9%
4856729 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.55 41.0 3.26e-01 80.6% 88.8%
3927945 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 37.0 3.26e-01 70.8% 54.8%
4032341 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.55 49.0 3.43e-01 100.0% 89.1%
4934385 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.54 48.0 3.58e-01 100.0% 62.1%
5026433 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 44.0 4.05e-01 94.4% 70.0%
3236723 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 43.0 3.07e-01 90.3% 39.1%
3544249 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 37.0 3.34e-01 75.0% 70.0%
3576228 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.53 40.0 3.71e-01 88.9% 63.0%
3407358 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.53 40.0 3.39e-01 84.7% 48.0%
81576 880.1.1.1 ↗ a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind 0.53 42.0 2.94e-01 91.7% 92.7%
3606648 2008.2.1.1 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo 0.53 41.0 3.54e-01 98.6% 52.5%
5076045 7573.1.1.1 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.52 38.0 2.83e-01 100.0% 29.0%
3992596 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 46.0 3.39e-01 100.0% 51.5%
3620293 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 46.0 3.81e-01 100.0% 66.2%
4574284 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 43.0 3.10e-01 97.2% 43.3%
3598626 2008.2.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like 0.52 42.0 3.94e-01 98.6% 72.2%
3992132 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.52 43.0 3.04e-01 91.7% 95.7%
4608081 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 45.0 2.90e-01 100.0% 34.5%
4207189 5046.1.1.1 ↗ extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › ATP-synt_B 0.52 38.0 2.66e-01 77.8% 26.1%
5028466 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.52 38.0 3.27e-01 95.8% 47.5%
4012856 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 36.0 3.05e-01 75.0% 81.5%
3253990 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 41.0 2.63e-01 100.0% 16.7%
3712817 2002.1.1.21 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PI-PLC-X 0.51 43.0 2.87e-01 100.0% 38.2%
5066637 2008.1.1.11 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › SfsA 0.51 42.0 3.44e-01 100.0% 78.1%
4457875 3511.1.1.1 ↗ a/b three-layered sandwiches › UPF0302 protein BA_1542/GBAA1542/BAS1430 › UPF0302 protein BA_1542/GBAA1542/BAS1430 › UPF0302 protein BA_1542/GBAA1542/BAS1430 › UPF0302 0.51 39.0 3.29e-01 90.3% 47.7%