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hypothetical_protein_1

Euk-Vir

Hubei_rhabdo-like_virus_1

hypothetical_protein_1__YP_009336980__Hubei_rhabdo-like_virus_1__1923185

Identity

Accession:
YP_009336980 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

65.7 mean pLDDT

Taxonomy

Hubei_rhabdo-like_virus_1

TaxID: 1923185

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 293-451
PDB
Domain cluster: rep: N__YP_009094307__Spodoptera_frugiperda_rhabdovirus__1481139__D357-494
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gicD02 1.10.3610.10 Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein 0.74 65.0 6.08e-01 93.7% 82.1%
2gttJ02 1.10.3610.10 Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein 0.72 65.0 6.13e-01 96.2% 82.1%
1cunA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 26.0 3.16e-01 81.8% 70.6%
4l7aA00 3.40.390.70 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › 0.52 37.0 3.15e-01 71.7% 77.8%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3835699 611.9.1.4 ↗ alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N 0.52 35.0 3.63e-01 100.0% 72.0%
5077285 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.52 43.0 3.20e-01 89.3% 92.0%
3463547 3755.4.1.17 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N 0.51 37.0 3.85e-01 100.0% 80.0%
D2 medium residues 52-113_133-175
PDB
D3 medium residues 176-198_232-289
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c0gA02 1.20.1150.12 Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain 0.59 42.0 3.87e-01 91.4% 57.5%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.58 37.0 3.78e-01 93.8% 64.6%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.57 36.0 3.82e-01 85.2% 76.1%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 42.0 3.81e-01 82.7% 59.3%
1s0pA01 1.25.40.330 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Adenylate cyclase-associated CAP, N-terminal domain 0.54 44.0 3.58e-01 93.8% 73.7%
4ie5A02 1.20.58.1470 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FTO C-terminal domain 0.54 44.0 3.76e-01 90.1% 66.4%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 43.0 4.01e-01 88.9% 78.6%
3t8vA05 1.25.50.10 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › Peptidase M1, alanyl aminopeptidase, C-terminal domain 0.53 46.0 3.08e-01 100.0% 37.8%
1z72A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.53 44.0 3.28e-01 93.8% 73.6%
3iq1B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 40.0 3.29e-01 84.0% 79.2%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.52 41.0 3.89e-01 88.9% 74.5%
3wozB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 45.0 3.32e-01 100.0% 58.5%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3412426 109.4.1.3512 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29676 0.61 51.0 3.60e-01 91.4% 59.2%
3688828 604.10.1.0 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac 0.59 45.0 4.82e-01 82.7% 100.0%
3501195 601.1.1.112 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Gaa1 0.58 50.0 3.62e-01 98.8% 60.4%
3900921 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.57 44.0 3.92e-01 84.0% 66.7%
4947640 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.54 44.0 3.13e-01 90.1% 58.4%
3502054 109.4.1.259 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tra1_ring 0.54 43.0 3.14e-01 90.1% 58.4%
3629293 109.4.1.1222 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PSME4 0.53 46.0 3.42e-01 100.0% 90.7%
3775185 622.1.1.0 ↗ alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain 0.53 45.0 3.59e-01 100.0% 44.9%
3794795 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.53 41.0 3.84e-01 84.0% 78.0%
4003906 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.52 41.0 3.59e-01 87.7% 54.6%
4013903 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.52 36.0 3.36e-01 72.8% 87.6%
3936312 309.1.1.4 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.51 44.0 3.17e-01 98.8% 82.7%
3583890 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.51 40.0 3.38e-01 87.7% 54.5%