←Back to structures

hypothetical_protein_1

Euk-Vir

Beihai_sobemo-like_virus_6

hypothetical_protein_1__YP_009337013__Beihai_sobemo-like_virus_6__1922703

Identity

Accession:: YP_009337013 ↗
Protein ID:: hypothetical_protein_1
Kingdom:: euk

Quality

62.1 mean pLDDT

Taxonomy

Beihai_sobemo-like_virus_6

TaxID: 1922703

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-83_95-123

PDB

D2 medium residues 142-159_259-354

PDB

Domain cluster: rep: trypsin-like_serine_protease-like_protein__YP_002321313__Oryctes_rhinoceros_nudivirus__92521__D215-339

D3 medium residues 160-258

PDB

D4 medium residues 680-734_795-808_840-956

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1rz4A02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.59	20.0	2.86e-01	84.4%	60.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5026040	4033.1.1.1 ↗	alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N	0.54	25.0	3.30e-01	86.0%	81.1%

D5 medium residues 1167-1213

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6whbA01	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.77	68.0	4.17e-01	100.0%	19.5%
3c5wA00	1.25.10.10	Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant	0.64	52.0	3.46e-01	100.0%	22.4%
1hx8A01	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.61	48.0	3.82e-01	100.0%	50.8%
5jxxA02	1.20.1180.10	Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain	0.61	48.0	4.46e-01	100.0%	69.7%
2pusA04	6.10.140.300	Special › Helix non-globular › Helix Hairpins ›	0.60	51.0	4.04e-01	100.0%	50.9%
4gzcA00	1.25.40.90	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.60	48.0	3.69e-01	100.0%	35.6%
2da3A01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.59	44.0	4.45e-01	100.0%	89.4%
2prsA02	3.40.50.1980	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain	0.58	48.0	3.70e-01	97.9%	65.8%
3lloA00	3.30.750.24	Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain	0.57	44.0	3.23e-01	87.2%	63.6%
1zq3P00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.55	41.0	3.81e-01	100.0%	61.8%
1pq4A02	3.40.50.1980	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain	0.54	46.0	3.65e-01	100.0%	56.3%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3385278	109.4.1.1277 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24	0.72	61.0	4.43e-01	100.0%	35.0%
3318819	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.72	57.0	3.88e-01	95.7%	24.0%
3821378	109.4.1.1262 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long	0.71	59.0	3.63e-01	100.0%	15.8%
3986794	639.2.1.1 ↗	alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB	0.67	53.0	4.72e-01	91.5%	68.6%
3815891	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.57	43.0	4.17e-01	100.0%	73.3%
3243459	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.57	45.0	4.28e-01	100.0%	73.3%