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hypothetical_protein_1

Euk-Vir

Hubei_diptera_virus_11

hypothetical_protein_1__YP_009337179__Hubei_diptera_virus_11__1922872

Identity

Accession:
YP_009337179 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

53.9 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Xinmoviridae› Alasvirus› Hubei_diptera_virus_11

TaxID: 1922872

Cluster

View cluster (23 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 117-196_198-261
PDB
D2 medium residues 288-371
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06407.16 best BDV_P40 28.5 1.10e-06 88.1% 19.2%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n93X02 1.10.3050.10 Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 2 › borna disease virus nucleoprotein, domain 2 0.80 70.0 6.05e-01 100.0% 62.2%
3owaB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.68 44.0 3.53e-01 98.8% 35.0%
4rm7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 40.0 3.43e-01 97.6% 38.8%
3a7mA01 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.62 39.0 3.59e-01 98.8% 48.2%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.59 42.0 3.96e-01 97.6% 61.2%
2uxwA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.56 42.0 3.65e-01 96.4% 51.5%
3buxB01 1.20.930.20 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain 0.56 39.0 3.45e-01 98.8% 48.8%
1vi0A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 41.0 3.40e-01 100.0% 46.2%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 40.0 3.82e-01 100.0% 66.3%
1bhaA00 1.10.287.170 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 38.0 4.23e-01 83.3% 92.5%
3cf6E05 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.53 45.0 3.37e-01 100.0% 48.5%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 44.0 4.43e-01 100.0% 90.8%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 40.0 3.80e-01 100.0% 68.6%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.52 34.0 3.78e-01 89.3% 83.8%
2etdA00 1.20.1440.20 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain 0.52 46.0 3.90e-01 100.0% 90.8%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3697861 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 43.0 3.15e-01 100.0% 25.0%
4966426 109.3.1.325 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › ATP-synt_C 0.66 42.0 3.27e-01 96.4% 31.8%
3700536 5041.1.1.1 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C 0.65 41.0 3.22e-01 96.4% 31.0%
3461715 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.62 40.0 3.76e-01 97.6% 54.0%
4999825 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.61 41.0 3.93e-01 100.0% 58.0%
3389526 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.61 40.0 3.80e-01 92.9% 57.0%
3298709 605.1.1.141 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Rx_N 0.61 38.0 3.35e-01 100.0% 43.2%
3250598 633.6.1.2 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX 0.60 42.0 3.38e-01 98.8% 36.7%
4023478 633.10.1.0 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like 0.57 50.0 3.94e-01 100.0% 81.1%
3295653 4268.2.1.0 ↗ alpha duplicates or obligate multimers › EspA/CesA-like › EspA chaperone CesA › EspA chaperone CesA 0.56 38.0 3.39e-01 100.0% 48.3%
3713780 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.56 38.0 3.39e-01 100.0% 48.0%
3786136 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.55 41.0 3.72e-01 100.0% 58.3%
3723805 604.1.1.123 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF202 0.53 42.0 3.98e-01 100.0% 72.4%
3180119 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.52 41.0 4.15e-01 100.0% 83.5%
3202098 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.52 42.0 3.50e-01 91.7% 91.0%
3988387 604.10.1.1 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PTS_IIA 0.51 40.0 3.81e-01 98.8% 71.0%
3477366 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.51 46.0 4.06e-01 100.0% 83.3%
3452232 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 3.14e-01 92.9% 64.2%