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hypothetical_protein_1

Euk-Vir

Shuangao_sobemo-like_virus_2

hypothetical_protein_1__YP_009337259__Shuangao_sobemo-like_virus_2__1923475

Identity

Accession:
YP_009337259 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

71.0 mean pLDDT

Taxonomy

TaxID: 1923475

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 287-335
PDB
Domain cluster: representative
CATH (82)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.75 58.0 4.69e-01 83.7% 46.7%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.75 53.0 3.49e-01 73.5% 34.6%
1wu7A03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.75 53.0 4.21e-01 75.5% 93.8%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.37e-01 98.0% 78.0%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.68 47.0 3.89e-01 73.5% 95.5%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 51.0 4.96e-01 83.7% 81.8%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 48.0 4.96e-01 83.7% 82.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.67 48.0 4.92e-01 81.6% 82.6%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 49.0 3.00e-01 79.6% 43.3%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 45.0 2.71e-01 71.4% 16.3%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.66 55.0 4.91e-01 93.9% 65.7%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.66 50.0 4.33e-01 85.7% 81.7%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 48.0 2.99e-01 79.6% 16.8%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.32e-01 93.9% 54.8%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 51.0 4.71e-01 87.8% 93.8%
3lm2A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 46.0 3.71e-01 75.5% 88.7%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 49.0 5.03e-01 93.9% 89.4%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.86e-01 91.8% 80.8%
2hezA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.64 45.0 2.74e-01 73.5% 92.4%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.64 48.0 4.77e-01 81.6% 80.4%
2czrA01 3.40.1350.70 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › TBP-interacting protein, N-terminal domain 0.63 46.0 3.64e-01 79.6% 70.8%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 51.0 3.38e-01 93.9% 72.6%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 4.96e-01 98.0% 84.9%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.62 47.0 4.32e-01 83.7% 66.7%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.62 50.0 3.78e-01 89.8% 73.6%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.62 49.0 3.82e-01 100.0% 39.0%
6hgcA01 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.62 43.0 3.00e-01 77.6% 72.3%
2ltrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 45.0 3.54e-01 77.6% 45.7%
4fo0A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.61 43.0 3.04e-01 75.5% 61.4%
1ekgA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.61 42.0 3.18e-01 71.4% 61.3%
3lovA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 53.0 3.76e-01 100.0% 78.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.45e-01 100.0% 67.7%
2eaqA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.61 50.0 4.26e-01 100.0% 79.8%
3h1tA01 3.90.1570.30 Alpha Beta › Alpha-Beta Complex › tt1808, chain A › 0.61 43.0 3.12e-01 75.5% 43.8%
6fucA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 43.0 3.70e-01 79.6% 83.7%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 51.0 4.23e-01 98.0% 77.8%
2ea9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 42.0 3.42e-01 75.5% 100.0%
3r6aB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 43.0 3.32e-01 79.6% 35.2%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.60 42.0 3.50e-01 79.6% 51.5%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 50.0 4.77e-01 98.0% 84.7%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.60 43.0 2.98e-01 75.5% 22.0%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 3.71e-01 98.0% 67.2%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 3.33e-01 81.6% 29.3%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.59 49.0 3.87e-01 100.0% 82.3%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.58 47.0 3.11e-01 93.9% 72.6%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 49.0 4.72e-01 100.0% 86.2%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.58 48.0 3.78e-01 95.9% 86.4%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.57e-01 98.0% 80.0%
4osnA00 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.58 49.0 3.84e-01 98.0% 86.4%
4j4hA01 3.40.50.12150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 45.0 3.38e-01 91.8% 69.6%
4bdxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.57 43.0 3.71e-01 83.7% 78.3%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 47.0 4.49e-01 98.0% 78.7%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.57 42.0 3.39e-01 85.7% 56.2%
1gkuB05 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 41.0 3.21e-01 79.6% 34.7%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 46.0 4.09e-01 95.9% 64.0%
6p8uA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.57 41.0 2.95e-01 77.6% 75.0%
1yqeA01 3.40.630.50 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like 0.57 42.0 2.90e-01 81.6% 23.1%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.56 40.0 3.10e-01 81.6% 51.1%
2dk6A01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 42.0 3.51e-01 85.7% 68.1%
1xd3C00 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.56 41.0 2.75e-01 83.7% 69.2%
3vp7A00 1.10.418.40 Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 0.56 40.0 2.79e-01 75.5% 58.4%
5wceA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 46.0 3.57e-01 100.0% 68.2%
3kyeA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 46.0 3.54e-01 95.9% 78.2%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 3.31e-01 100.0% 62.8%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 46.0 4.38e-01 98.0% 83.1%
5gaeG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.55 40.0 3.46e-01 79.6% 80.2%
7cr6D01 3.100.10.20 Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain 0.55 45.0 3.92e-01 98.0% 76.8%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 45.0 4.34e-01 98.0% 86.2%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.55 41.0 3.31e-01 83.7% 81.0%
1b9mB02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 41.0 3.69e-01 83.7% 73.6%
4lxqB00 3.40.50.12230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 41.0 2.58e-01 83.7% 44.9%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.54 45.0 2.72e-01 100.0% 24.2%
2jo6A00 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.53 41.0 3.34e-01 91.8% 96.4%
2r5vB02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 37.0 2.64e-01 79.6% 87.7%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.53 41.0 3.53e-01 89.8% 58.8%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 43.0 3.36e-01 98.0% 83.8%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.52 42.0 3.30e-01 91.8% 84.4%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 41.0 2.58e-01 100.0% 81.0%
2o30A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.53e-01 93.9% 82.9%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.50 42.0 2.90e-01 100.0% 59.6%
3n5mB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 42.0 2.97e-01 100.0% 68.8%
1sqwA01 3.10.450.220 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 36.0 3.10e-01 83.7% 68.8%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5014250 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 63.0 5.32e-01 89.8% 53.8%
3709315 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.77 59.0 4.40e-01 83.7% 60.0%
3283640 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.76 65.0 3.94e-01 100.0% 15.5%
2391944 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.73 54.0 4.46e-01 79.6% 52.3%
4974477 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.73 57.0 4.71e-01 89.8% 47.8%
5056706 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 50.0 5.04e-01 83.7% 74.0%
4021643 719.2.1.0 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.72 51.0 3.99e-01 75.5% 88.6%
4146735 219.1.1.159 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6005 0.71 62.0 4.26e-01 100.0% 30.6%
4930179 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 49.0 4.79e-01 85.7% 67.3%
5064802 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 49.0 4.08e-01 75.5% 48.9%
3347851 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 53.0 4.73e-01 100.0% 58.6%
3515688 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 54.0 4.13e-01 87.8% 65.8%
5058682 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.69 53.0 3.46e-01 85.7% 89.5%
3937459 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 54.0 4.32e-01 89.8% 72.0%
4968405 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.67 51.0 3.96e-01 83.7% 42.7%
5061180 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.67 50.0 4.09e-01 81.6% 48.4%
5038830 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.67 49.0 3.91e-01 79.6% 45.0%
3579494 5.1.5.171 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Str_synth 0.67 49.0 3.06e-01 79.6% 20.7%
3464671 4.1.1.136 beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.66 52.0 4.68e-01 95.9% 61.4%
3623430 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.66 45.0 3.15e-01 73.5% 21.3%
3595832 375.8.1.0 few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.66 48.0 4.69e-01 79.6% 72.7%
3702383 2498.1.1.14 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 0.66 50.0 3.13e-01 83.7% 23.8%
5002449 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 45.0 4.45e-01 83.7% 67.3%
4463837 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.65 49.0 3.86e-01 81.6% 46.7%
4943886 230.1.1.0 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.65 53.0 3.73e-01 91.8% 65.6%
3370663 896.1.1.1 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.65 53.0 5.15e-01 100.0% 89.8%
3400449 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 52.0 3.66e-01 95.9% 26.9%
3904747 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.64 55.0 4.02e-01 100.0% 40.0%
3998167 247.1.1.0 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.64 52.0 3.38e-01 95.9% 19.6%
None 0.64 49.0 3.15e-01 85.7% 24.3%
3484776 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 48.0 3.62e-01 81.6% 40.8%
5033222 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.63 47.0 3.72e-01 81.6% 43.8%
3384455 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.63 53.0 3.65e-01 100.0% 73.5%
3239485 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 52.0 3.96e-01 98.0% 60.8%
4517523 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.63 46.0 3.75e-01 81.6% 47.0%
3731304 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.62 45.0 3.14e-01 77.6% 86.2%
3234330 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.62 46.0 3.67e-01 83.7% 46.4%
4944397 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 46.0 4.62e-01 81.6% 82.0%
4998620 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.62 49.0 3.12e-01 98.0% 15.8%
4050524 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.62 48.0 4.42e-01 87.8% 92.3%
4931934 241.9.1.0 a+b two layers › Type III secretory system chaperone-like › YdhG-like › YdhG-like 0.62 45.0 3.55e-01 79.6% 81.0%
3453949 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 44.0 2.73e-01 77.6% 13.8%
3730875 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.62 49.0 4.07e-01 91.8% 91.6%
3789418 2484.1.1.2 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.62 43.0 2.43e-01 75.5% 33.1%
3786078 109.4.1.1764 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28917 0.61 50.0 2.94e-01 98.0% 22.4%
5081646 7528.1.1.0 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains 0.61 44.0 3.51e-01 77.6% 85.7%
3250581 3409.1.1.1 a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 0.61 43.0 2.65e-01 75.5% 35.3%
397140 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.61 50.0 4.24e-01 95.9% 79.5%
4945305 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.61 42.0 3.66e-01 79.6% 43.5%
3804709 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.61 45.0 2.81e-01 85.7% 13.3%
5061231 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.59 40.0 3.84e-01 71.4% 58.3%
4928574 241.11.1.0 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like 0.59 43.0 3.58e-01 79.6% 75.0%
3252046 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.59 42.0 2.83e-01 81.6% 18.7%
3799246 3409.1.1.1 a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 0.59 41.0 2.81e-01 75.5% 37.3%
4973804 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 4.28e-01 98.0% 73.3%
3484813 319.1.1.5 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS 0.58 48.0 4.12e-01 98.0% 94.1%
5071984 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 50.0 3.64e-01 100.0% 64.3%
3447587 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.58 52.0 3.13e-01 100.0% 81.2%
4261008 220.1.1.290 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_5 0.58 48.0 3.91e-01 100.0% 94.3%
5051764 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.58 44.0 3.17e-01 85.7% 29.0%
4276957 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.58 45.0 4.48e-01 98.0% 92.7%
3216246 2004.1.1.230 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like 0.57 44.0 3.03e-01 83.7% 29.1%
3902541 319.1.1.5 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PIH1_CS 0.57 46.0 4.01e-01 98.0% 91.8%
4945408 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 47.0 3.60e-01 95.9% 78.3%
5048237 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.57 46.0 3.54e-01 95.9% 75.0%
3216405 3523.1.1.0 beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) 0.57 46.0 3.41e-01 98.0% 52.4%
3869545 220.1.1.125 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PLEKHM2 0.56 44.0 3.43e-01 100.0% 50.7%
1177137 220.1.1.43 beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.56 43.0 3.70e-01 100.0% 72.0%
5026901 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 41.0 3.95e-01 83.7% 68.3%
4976643 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 45.0 3.44e-01 95.9% 73.6%
4983266 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.55 47.0 3.48e-01 98.0% 70.0%
4864637 7008.1.1.1 alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa 0.55 41.0 3.08e-01 83.7% 34.1%
4027011 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 38.0 2.38e-01 75.5% 22.6%
4929825 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 47.0 3.55e-01 100.0% 80.7%
4972261 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.54 45.0 3.30e-01 95.9% 68.1%
3195886 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.54 40.0 2.45e-01 81.6% 28.6%
4239781 3006.1.1.6 a+b two layers › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › Sm-Like archaeal protein Smap3, C-terminal domain › CPSF73-100_C 0.53 38.0 3.50e-01 79.6% 60.0%
3396193 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 43.0 3.31e-01 98.0% 45.4%
5050210 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.53 44.0 3.43e-01 100.0% 78.3%
3632181 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.53 39.0 2.75e-01 81.6% 55.7%
3927192 3523.1.1.0 beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) 0.53 42.0 3.20e-01 100.0% 43.6%
5050773 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.23e-01 100.0% 65.8%
5075537 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 43.0 3.36e-01 100.0% 78.2%
4928701 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.52e-01 98.0% 87.6%
4990252 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 3.40e-01 81.6% 75.7%
4160601 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 38.0 3.06e-01 83.7% 37.4%
5035465 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.51 42.0 3.35e-01 100.0% 81.7%
4940035 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 42.0 3.33e-01 95.9% 69.1%
3295258 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.50 43.0 3.35e-01 100.0% 51.3%
D2 medium residues 83-106_193-282
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 67.0 7.13e-01 86.0% 100.0%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 60.0 6.25e-01 78.1% 97.1%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.79 62.0 5.02e-01 81.6% 95.1%
3h7oB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 55.0 5.61e-01 72.8% 100.0%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 67.0 6.68e-01 90.4% 95.7%
1azzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 61.0 6.03e-01 81.6% 100.0%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 60.0 6.01e-01 81.6% 100.0%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 53.0 5.69e-01 71.1% 96.0%
5fahA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 62.0 6.16e-01 84.2% 100.0%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 53.0 5.48e-01 71.1% 96.3%
5fcrA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 59.0 5.82e-01 81.6% 100.0%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 53.0 5.72e-01 71.9% 96.8%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 57.0 5.60e-01 81.6% 100.0%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 54.0 5.35e-01 78.9% 100.0%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.71 55.0 4.70e-01 81.6% 96.7%
2rdlA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 55.0 5.48e-01 82.5% 100.0%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 52.0 5.66e-01 78.9% 98.9%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 42.0 4.26e-01 71.1% 91.2%
2xnjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 36.0 3.74e-01 80.7% 75.0%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.51 30.0 3.23e-01 93.0% 64.7%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3436414 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 67.0 5.34e-01 85.1% 98.1%
3969197 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 69.0 5.10e-01 88.6% 97.7%
3449628 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 62.0 6.20e-01 78.9% 83.5%
4205419 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 69.0 5.34e-01 89.5% 98.3%
3443528 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.80 65.0 5.14e-01 85.1% 98.6%
2710030 1.1.5.12 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S39 0.79 68.0 5.57e-01 89.5% 100.0%
4005257 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 69.0 5.30e-01 92.1% 99.6%
3462061 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.79 64.0 5.07e-01 85.1% 97.2%
3896593 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 59.0 5.52e-01 78.9% 86.3%
3432441 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 66.0 4.97e-01 90.4% 92.2%
3503759 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.77 60.0 4.48e-01 81.6% 91.7%
3403377 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 64.0 4.87e-01 89.5% 92.4%
3213725 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.76 61.0 4.52e-01 85.1% 90.1%
3434538 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 61.0 4.87e-01 85.1% 97.7%
3234951 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.74 60.0 4.57e-01 86.0% 91.6%
3433009 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.74 66.0 5.02e-01 96.5% 85.5%
3447254 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 64.0 5.06e-01 93.9% 98.2%
3222818 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.72 60.0 4.53e-01 87.7% 89.0%
3280223 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.71 67.0 5.46e-01 99.1% 95.4%
3969739 1.1.17.9 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › PF30586 0.71 63.0 4.84e-01 93.9% 99.6%
3867774 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.71 64.0 4.07e-01 95.6% 74.2%
3387073 1.1.5.16 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.71 49.0 4.02e-01 71.1% 51.3%
2779726 1.1.17.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.68 56.0 4.75e-01 87.7% 100.0%
3277840 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 63.0 5.07e-01 99.1% 94.1%
3545090 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.67 62.0 4.87e-01 98.2% 85.0%
4934715 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.67 61.0 4.72e-01 97.4% 94.9%
3598734 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 57.0 4.43e-01 97.4% 85.1%
3221009 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.61 56.0 4.62e-01 100.0% 92.5%
4882551 1.1.5.5 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.60 52.0 4.72e-01 92.1% 94.6%
3246847 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 55.0 4.57e-01 100.0% 87.2%
1147338 1.1.5.5 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.59 52.0 4.78e-01 93.9% 97.9%
142515 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.53 36.0 3.70e-01 80.7% 72.9%
3668360 1.1.7.10 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.53 38.0 3.62e-01 74.6% 71.1%
3500542 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.51 32.0 3.57e-01 73.7% 81.1%
D3 medium residues 107-192
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 79.0 7.66e-01 98.8% 100.0%
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 56.0 6.40e-01 89.5% 95.4%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 61.0 6.45e-01 100.0% 94.7%
5y2dA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 61.0 5.46e-01 100.0% 63.3%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 62.0 6.08e-01 100.0% 83.7%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 62.0 6.18e-01 100.0% 87.6%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 62.0 4.66e-01 100.0% 38.4%
2olgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 66.0 5.75e-01 98.8% 90.7%
4rqyA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 65.0 5.73e-01 100.0% 68.3%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 56.0 5.71e-01 86.0% 84.7%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 5.99e-01 100.0% 80.2%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 62.0 5.59e-01 100.0% 88.1%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 55.0 4.75e-01 95.3% 78.3%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 55.0 4.79e-01 95.3% 91.9%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 55.0 4.47e-01 95.3% 73.2%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 54.0 4.27e-01 95.3% 74.3%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 50.0 4.72e-01 86.0% 70.4%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 57.0 5.55e-01 98.8% 92.5%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 54.0 4.52e-01 95.3% 61.0%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 53.0 4.53e-01 95.3% 81.5%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 54.0 4.61e-01 95.3% 77.6%
1wqsA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 52.0 4.93e-01 89.5% 91.3%
2fg9A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 53.0 4.42e-01 95.3% 79.9%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 53.0 4.57e-01 95.3% 78.9%
1yg9A03 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.63 50.0 4.57e-01 88.4% 98.3%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 52.0 4.50e-01 95.3% 77.5%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 52.0 4.54e-01 95.3% 79.0%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 52.0 4.56e-01 95.3% 83.0%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 4.53e-01 89.5% 93.1%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 50.0 4.31e-01 95.3% 78.5%
1etb200 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.57 48.0 4.38e-01 94.2% 78.6%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 45.0 3.92e-01 86.0% 64.1%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 45.0 4.30e-01 89.5% 81.4%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 4.09e-01 76.7% 89.5%
3orqA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 40.0 3.11e-01 77.9% 79.1%
4ecnA02 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.56 46.0 4.20e-01 95.3% 76.2%
1dpjA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 47.0 3.99e-01 98.8% 89.6%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 49.0 4.26e-01 98.8% 80.5%
3fx3B01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 33.0 2.87e-01 100.0% 37.5%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.55 38.0 3.11e-01 73.3% 43.5%
3lnnA01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.53 42.0 4.13e-01 87.2% 95.6%
4mamB03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 42.0 3.34e-01 88.4% 81.9%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 42.0 3.31e-01 87.2% 83.9%
4e4tA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 41.0 3.23e-01 87.2% 84.7%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.52 43.0 4.04e-01 95.3% 72.7%
3k5iA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 42.0 3.26e-01 88.4% 84.3%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.61e-01 100.0% 72.1%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1308507 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 67.0 5.13e-01 100.0% 41.7%
260 1.1.5.22 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S32 0.77 61.0 4.61e-01 100.0% 36.4%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.77 64.0 5.00e-01 100.0% 43.3%
3437290 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.74 68.0 5.01e-01 100.0% 44.7%
4939745 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 68.0 4.98e-01 100.0% 40.5%
3649347 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.73 67.0 5.57e-01 100.0% 71.7%
3454710 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 64.0 4.76e-01 100.0% 38.6%
3532116 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 65.0 4.79e-01 100.0% 39.5%
4169622 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.71 64.0 4.73e-01 100.0% 38.6%
3970225 1.1.13.68 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 0.71 59.0 5.82e-01 89.5% 95.6%
3420315 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.71 64.0 4.88e-01 100.0% 45.5%
398505 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.71 64.0 4.68e-01 100.0% 37.7%
3957702 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.71 61.0 5.23e-01 100.0% 60.0%
3428386 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.70 64.0 4.54e-01 100.0% 36.4%
3432441 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 63.0 4.50e-01 100.0% 35.7%
3493511 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.69 62.0 4.49e-01 100.0% 37.0%
4946849 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.68 55.0 4.43e-01 89.5% 71.8%
3280223 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.67 60.0 4.64e-01 100.0% 48.7%
2141908 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.67 56.0 4.35e-01 100.0% 41.0%
3289582 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 56.0 4.81e-01 93.0% 87.0%
5011498 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 56.0 5.53e-01 90.7% 91.0%
3280500 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.66 54.0 4.56e-01 89.5% 83.3%
3164508 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.66 56.0 4.54e-01 95.3% 72.9%
162092 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.66 55.0 4.88e-01 95.3% 85.5%
4953373 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.65 55.0 4.84e-01 95.3% 83.5%
4514555 1.1.5.18 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 0.64 54.0 4.23e-01 95.3% 75.9%
3387649 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 54.0 4.73e-01 95.3% 85.9%
1291989 1.1.5.42 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ-like 0.64 57.0 5.55e-01 98.8% 92.5%
161810 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.64 54.0 4.52e-01 95.3% 72.5%
4085222 1.1.5.9 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.64 53.0 4.08e-01 95.3% 66.7%
4931814 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.64 49.0 4.24e-01 84.9% 84.3%
3726267 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.63 56.0 4.24e-01 100.0% 80.0%
3404828 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.63 53.0 4.19e-01 95.3% 64.2%
4424877 1.1.5.9 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.63 53.0 4.25e-01 95.3% 67.6%
3720872 1.1.5.36 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like 0.63 53.0 4.23e-01 95.3% 65.4%
5024463 1.1.5.10 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.63 56.0 4.44e-01 100.0% 81.5%
3180762 1.1.5.9 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C 0.63 53.0 4.02e-01 95.3% 68.4%
3290435 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.63 51.0 4.10e-01 89.5% 78.8%
3536857 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.62 52.0 4.30e-01 95.3% 80.0%
1249509 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 53.0 4.47e-01 96.5% 90.1%
4926946 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.62 47.0 4.79e-01 83.7% 88.2%
4927529 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.62 50.0 4.75e-01 89.5% 98.1%
3284585 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.62 49.0 4.38e-01 88.4% 83.7%
5028702 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.61 51.0 4.45e-01 95.3% 80.0%
4928817 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.61 51.0 4.36e-01 95.3% 84.0%
3280574 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.61 50.0 4.37e-01 94.2% 85.0%
3956576 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.61 48.0 4.21e-01 89.5% 87.9%
3325410 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 50.0 4.50e-01 95.3% 77.5%
3587587 11.1.4.36 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.58 49.0 4.50e-01 91.9% 79.1%
3618061 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 49.0 4.79e-01 95.3% 89.5%
3504380 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.57 46.0 3.91e-01 91.9% 58.1%
3289825 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.57 46.0 4.36e-01 89.5% 97.1%
3625601 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 3.89e-01 77.9% 95.0%
4016611 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 37.0 3.67e-01 70.9% 63.2%
4221193 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.54 46.0 3.23e-01 100.0% 64.0%
3519897 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.58e-01 83.7% 63.8%
2056874 206.1.3.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 0.52 41.0 3.32e-01 87.2% 83.1%
1005444 295.2.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › Outer surface protein E › Outer surface protein E › OspE 0.52 46.0 3.83e-01 98.8% 86.8%
3499365 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 43.0 3.68e-01 100.0% 92.3%
3901436 11.2.1.58 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.50 41.0 3.20e-01 94.2% 61.9%
3230048 220.1.1.67 beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 0.50 38.0 3.21e-01 81.4% 62.0%