←Back to structures

hypothetical_protein_1

Euk-Vir

Shuangao_insect_virus_9

hypothetical_protein_1__YP_009337272__Shuangao_insect_virus_9__1923470

Identity

Accession:
YP_009337272 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

61.8 mean pLDDT

Taxonomy

Shuangao_insect_virus_9

TaxID: 1923470

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-103
PDB
D2 medium residues 126-214
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009329993__Hubei_sobemo-like_virus_6__1923239__D113-207
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 58.0 6.68e-01 83.1% 98.5%
2olgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 66.0 5.75e-01 89.9% 90.7%
2xxlA03 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 65.0 5.68e-01 89.9% 85.4%
4h4fA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 65.0 6.04e-01 89.9% 89.1%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 67.0 6.64e-01 93.3% 98.9%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 60.0 6.49e-01 92.1% 97.4%
5lhrA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 64.0 5.82e-01 89.9% 90.6%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 66.0 6.29e-01 92.1% 96.0%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 64.0 5.87e-01 89.9% 86.6%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 61.0 4.52e-01 87.6% 45.2%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 62.0 5.70e-01 89.9% 90.3%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.74 64.0 4.78e-01 94.4% 40.4%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 58.0 6.01e-01 84.3% 89.4%
5y2dA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 62.0 5.55e-01 94.4% 66.7%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 61.0 5.75e-01 89.9% 87.9%
4yo1A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 63.0 6.39e-01 94.4% 93.3%
2b9lA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 60.0 4.94e-01 89.9% 64.3%
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 59.0 5.61e-01 87.6% 87.5%
5hmaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 63.0 6.36e-01 94.4% 98.9%
1ep5A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 49.0 5.57e-01 87.6% 100.0%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 64.0 6.39e-01 100.0% 98.9%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 52.0 4.09e-01 79.8% 44.8%
3u5wA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 54.0 4.84e-01 87.6% 85.7%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 54.0 4.19e-01 88.8% 71.4%
1wkrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.64 52.0 4.24e-01 89.9% 88.8%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 52.0 5.22e-01 92.1% 92.5%
2ynaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 52.0 5.31e-01 89.9% 98.9%
5n70A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.63 51.0 4.31e-01 91.0% 90.7%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 45.0 4.33e-01 75.3% 86.0%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 51.0 5.14e-01 91.0% 100.0%
4m9fA00 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 49.0 3.83e-01 87.6% 87.5%
1smrA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.61 49.0 4.19e-01 91.0% 90.3%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 42.0 4.40e-01 71.9% 87.3%
1am5A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.60 48.0 4.15e-01 91.0% 90.8%
1dpjA02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.60 48.0 4.10e-01 91.0% 90.3%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 27.0 3.09e-01 71.9% 54.7%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.59 41.0 3.89e-01 73.0% 65.8%
3wnzA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.58 41.0 3.55e-01 74.2% 75.0%
5xctB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 3.77e-01 71.9% 94.6%
4lwoB02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.58 45.0 3.64e-01 86.5% 96.7%
7tbdB02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.57 46.0 3.90e-01 91.0% 87.7%
7ffnN01 2.60.40.3200 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, A domain 0.57 40.0 3.21e-01 74.2% 51.4%
6mjjC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 38.0 3.60e-01 71.9% 96.5%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 4.08e-01 88.8% 73.6%
4bfiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.45e-01 71.9% 94.6%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 39.0 3.32e-01 79.8% 47.7%
2fmyA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 38.0 3.35e-01 78.7% 74.3%
6dgiA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 37.0 3.17e-01 76.4% 72.9%
1f97A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.41e-01 71.9% 97.1%
4p25D01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.50 34.0 2.68e-01 70.8% 32.0%
2aegA02 3.90.1680.20 Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › 0.50 40.0 3.58e-01 92.1% 73.0%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 63.0 5.07e-01 92.1% 44.4%
3394133 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 74.0 5.35e-01 100.0% 42.2%
4247621 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.79 72.0 5.17e-01 100.0% 46.9%
3414359 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.00e-01 100.0% 40.0%
3409759 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.06e-01 100.0% 45.0%
3397446 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.11e-01 100.0% 42.0%
3405652 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 72.0 5.13e-01 100.0% 44.9%
5063379 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.78 64.0 5.03e-01 92.1% 43.9%
3926042 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.77 66.0 4.57e-01 91.0% 46.4%
3412320 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 68.0 4.65e-01 95.5% 37.8%
3527303 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 71.0 4.95e-01 100.0% 41.9%
3514666 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 70.0 5.34e-01 100.0% 57.5%
4545500 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 5.08e-01 100.0% 46.2%
3390983 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 4.96e-01 100.0% 42.5%
3406163 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 70.0 5.00e-01 100.0% 46.9%
3397934 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 69.0 4.84e-01 100.0% 42.4%
3397483 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 69.0 4.75e-01 98.9% 40.4%
4125357 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 69.0 5.01e-01 100.0% 48.3%
3791975 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 68.0 4.77e-01 98.9% 48.1%
4532479 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.90e-01 100.0% 44.6%
3530898 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.74 64.0 4.44e-01 93.3% 37.9%
3229867 1.1.17.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.71 64.0 4.54e-01 98.9% 51.4%
3502140 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 64.0 4.60e-01 98.9% 48.4%
3838338 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 50.0 5.14e-01 73.0% 98.8%
4997066 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 45.0 4.44e-01 70.8% 100.0%
4024902 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.66 52.0 3.39e-01 86.5% 36.3%
1790393 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 47.0 4.88e-01 79.8% 82.9%
3395325 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.64 52.0 3.53e-01 89.9% 39.4%
1291989 1.1.5.42 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ-like 0.63 52.0 5.22e-01 92.1% 92.5%
None — 0.63 49.0 4.05e-01 84.3% 48.2%
1249509 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.63 51.0 4.33e-01 89.9% 91.4%
3218850 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.63 51.0 3.35e-01 89.9% 35.6%
2863428 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 49.0 3.89e-01 85.4% 76.8%
4425367 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 43.0 4.01e-01 70.8% 92.7%
4670281 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.62 50.0 3.48e-01 91.0% 40.9%
4767780 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 50.0 4.10e-01 91.0% 80.7%
1320102 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 50.0 4.17e-01 91.0% 87.2%
3472014 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 51.0 3.40e-01 92.1% 37.6%
3518857 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.62 49.0 3.10e-01 89.9% 26.7%
4221193 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.60 49.0 3.46e-01 93.3% 42.2%
1322884 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.60 49.0 3.66e-01 91.0% 59.3%
3576228 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.60 31.0 3.11e-01 89.9% 46.7%
3522295 1.1.1.2 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp,A1_Propeptide 0.60 49.0 3.24e-01 89.9% 36.7%
3248403 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 45.0 4.01e-01 82.0% 54.1%
5010981 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 34.0 4.16e-01 85.4% 90.9%
1088760 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.60 48.0 3.91e-01 91.0% 76.8%
3637907 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.58 47.0 3.78e-01 91.0% 73.5%
5033093 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 39.0 3.67e-01 70.8% 87.0%
3256005 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 3.79e-01 74.2% 93.0%
3408507 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.57 48.0 3.28e-01 100.0% 68.0%
166904 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 27.0 3.04e-01 74.2% 56.1%
3184535 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.56 46.0 3.07e-01 93.3% 66.3%
436188 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.56 27.0 3.03e-01 74.2% 55.2%
2429554 1.1.1.27 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.54 44.0 3.09e-01 93.3% 64.8%
3495354 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.53 44.0 4.11e-01 92.1% 92.2%
4023661 1.1.1.1 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.53 42.0 2.89e-01 93.3% 32.6%
3535818 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.53 37.0 3.58e-01 71.9% 87.0%
3521963 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.52 34.0 3.17e-01 73.0% 53.6%
3978088 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 32.0 3.61e-01 89.9% 86.2%
D3 medium residues 215-300
PDB
Domain cluster: rep: hypothetical_protein_1__YP_009337259__Shuangao_sobemo-like_virus_2__1923475__D83-106_193-282
D4 medium residues 301-353
PDB