←Back to structures

hypothetical_protein_1

Euk-Vir

Hubei_diptera_virus_12

hypothetical_protein_1__YP_009337872__Hubei_diptera_virus_12__1922873

Identity

Accession:
YP_009337872 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

63.4 mean pLDDT

Taxonomy

Hubei_diptera_virus_12

TaxID: 1922873

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-102_116-173
PDB
D2 high residues 194-361_376-395
PDB
Domain cluster: rep: uncovered_polypeptide_polyprotein__YP_529550_615-1154__Newbury_agent_1__331642__D396-536
D3 medium residues 456-524
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wjpA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.75 36.0 4.80e-01 85.5% 100.0%
6e94A02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 41.0 4.48e-01 91.3% 92.9%
2ctdA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.58 46.0 4.20e-01 89.9% 69.8%
4r2qA00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 41.0 3.77e-01 81.2% 60.2%
3rbtD01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 33.0 2.73e-01 89.9% 34.4%
4f03A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 38.0 3.35e-01 89.9% 53.3%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3566826 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 42.0 4.82e-01 75.4% 78.0%
3240607 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 40.0 5.14e-01 72.5% 95.0%
None — 0.72 41.0 4.55e-01 89.9% 70.9%
3566372 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.69 43.0 4.00e-01 76.8% 51.8%
3517430 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.69 40.0 4.12e-01 73.9% 61.5%
3760613 386.1.1.238 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.67 51.0 4.90e-01 100.0% 72.5%
3868799 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 51.0 4.77e-01 98.6% 67.1%
3791304 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.66 46.0 5.26e-01 73.9% 100.0%
3791983 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.64 45.0 4.97e-01 73.9% 94.5%
3414477 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 46.0 5.10e-01 92.8% 98.2%
3998067 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.62 44.0 4.11e-01 73.9% 65.9%
None — 0.62 46.0 5.09e-01 76.8% 98.2%
3627003 386.1.1.238 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.62 43.0 4.27e-01 75.4% 70.0%
3844951 386.1.1.24 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.61 43.0 4.18e-01 76.8% 65.0%
3531637 386.1.1.233 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2 0.61 44.0 3.76e-01 82.6% 48.2%
3525175 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.60 41.0 3.93e-01 73.9% 62.4%
3204103 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.59 38.0 4.09e-01 82.6% 75.0%
3470859 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.59 41.0 3.93e-01 72.5% 65.0%
3401522 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.59 44.0 4.09e-01 78.3% 63.5%
3471682 386.1.1.242 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_16 0.58 42.0 3.84e-01 75.4% 64.4%
3791965 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.58 41.0 3.96e-01 78.3% 64.6%
4195872 556.1.1.0 ↗ alpha arrays › KRAB domain (Kruppel-associated box, Pfam 01352) › KRAB domain (Kruppel-associated box, Pfam 01352) › KRAB domain (Kruppel-associated box, Pfam 01352) 0.58 40.0 3.37e-01 73.9% 43.5%
3309023 386.1.1.57 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › TRAFD1-XIAF1_ZnF 0.58 48.0 4.14e-01 92.8% 72.7%
3695190 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 46.0 4.51e-01 88.4% 84.0%
3203481 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 41.0 4.47e-01 75.4% 100.0%
3858411 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.57 40.0 3.75e-01 78.3% 60.0%
3921366 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.57 44.0 4.34e-01 88.4% 84.0%
3571810 386.1.1.233 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2 0.57 41.0 3.28e-01 82.6% 39.3%
3534206 386.1.1.392 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › C2H2_ASCIZ_4th 0.57 40.0 4.09e-01 75.4% 81.5%
3524086 386.1.1.238 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.56 41.0 3.12e-01 78.3% 32.7%
3870711 386.1.1.1 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 0.56 41.0 4.54e-01 88.4% 94.5%
3546633 386.1.1.238 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.56 41.0 3.82e-01 78.3% 62.4%
3414376 386.1.1.238 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_6 0.56 47.0 4.30e-01 98.6% 91.6%
3500373 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 45.0 3.09e-01 97.1% 75.4%
3731208 386.1.1.237 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 0.54 44.0 3.91e-01 87.0% 100.0%
3271776 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.53 41.0 3.76e-01 84.1% 88.9%
3895780 386.1.1.24 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 0.52 38.0 3.95e-01 76.8% 93.8%
3207622 386.1.1.229 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_fungi_2 0.50 42.0 3.32e-01 100.0% 51.2%