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hypothetical_protein_2
Euk-VirHubei_sobemo-like_virus_7
hypothetical_protein_2__YP_009330005__Hubei_sobemo-like_virus_7__1923240
Identity
- Accession:
- YP_009330005 ↗
- Protein ID:
- hypothetical_protein_2
- Kingdom:
- euk
Quality
85.9
mean pLDDT
Cluster
View cluster (85 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-20_57-116
D2
medium
residues 21-56_117-209
D3
medium
residues 210-285
Domain cluster:
rep: hypothetical_protein_2__YP_009330007__Hubei_sobemo-like_virus_5__1923238__D205-264
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nkyA03 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.74 | 53.0 | 5.45e-01 | 76.3% | 84.9% |
| 2fji102 | 1.10.357.70 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex component Sec6, C-terminal domain | 0.59 | 51.0 | 3.90e-01 | 100.0% | 90.0% |
| 1w98B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 41.0 | 3.43e-01 | 88.2% | 94.6% |
| 1lrvA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 32.0 | 2.36e-01 | 71.1% | 19.7% |
| 7k18A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.51 | 36.0 | 3.10e-01 | 77.6% | 88.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2390376 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.73 | 54.0 | 4.91e-01 | 78.9% | 67.0% |
| 1147677 | 4967.1.1.2 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RdRP_1 | 0.72 | 53.0 | 5.11e-01 | 78.9% | 74.7% |
| 1575638 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.68 | 48.0 | 4.49e-01 | 75.0% | 59.6% |
| 3373847 | 109.4.1.266 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › XMAP215_CLASP_TOG | 0.65 | 47.0 | 3.73e-01 | 77.6% | 41.2% |
| 4295325 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.65 | 49.0 | 2.82e-01 | 80.3% | 10.2% |
| 3276432 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 46.0 | 2.81e-01 | 77.6% | 21.0% |
| 3170792 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.62 | 52.0 | 3.26e-01 | 94.7% | 21.9% |
| None | — | 0.62 | 47.0 | 2.73e-01 | 82.9% | 11.0% | |
| 3870757 | 109.4.1.934 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ATR | 0.60 | 41.0 | 3.75e-01 | 71.1% | 67.6% |
| 3204880 | 109.4.1.934 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ATR | 0.59 | 43.0 | 3.70e-01 | 78.9% | 70.4% |
| 4601538 | 109.4.1.1565 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF3_p135, TPR_10, TPR_12 | 0.57 | 45.0 | 2.69e-01 | 90.8% | 62.1% |
| 4199194 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.56 | 42.0 | 2.80e-01 | 82.9% | 50.3% |
| 3350694 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 37.0 | 3.35e-01 | 71.1% | 82.7% |