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hypothetical_protein_2

Euk-Vir

Hubei_tetragnatha_maxillosa_virus_6

hypothetical_protein_2__YP_009330269__Hubei_tetragnatha_maxillosa_virus_6__1923248

Identity

Accession:: YP_009330269 ↗
Protein ID:: hypothetical_protein_2
Kingdom:: euk

Quality

91.3 mean pLDDT

Taxonomy

Hubei_tetragnatha_maxillosa_virus_6

TaxID: 1923248

Cluster

View cluster (85 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 276-336

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2chpA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.75	53.0	3.99e-01	75.4%	55.4%
3nkyA03	1.20.960.20	Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A ›	0.73	62.0	5.93e-01	96.7%	80.8%
1umnG00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.68	50.0	3.71e-01	80.3%	81.2%
2qqyA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.67	50.0	3.94e-01	82.0%	92.0%
1n1cA02	1.20.1280.20	Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain	0.67	49.0	4.53e-01	80.3%	84.1%
1sumB02	1.20.58.220	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2	0.65	50.0	4.13e-01	86.9%	85.6%
2gmyD00	1.20.1290.10	Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like	0.64	53.0	4.10e-01	95.1%	53.1%
2kjgA00	1.20.120.970	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.62	43.0	3.76e-01	73.8%	88.9%
1yozA00	1.10.3200.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like	0.61	50.0	4.21e-01	95.1%	97.3%
3u4qB04	6.10.140.1030	Special › Helix non-globular › Helix Hairpins ›	0.59	48.0	4.67e-01	93.4%	94.2%
1uujA00	1.20.960.30	Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A ›	0.57	40.0	3.84e-01	77.0%	63.2%
1zvwA01	1.20.970.10	Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C	0.56	44.0	4.41e-01	96.7%	98.5%
3rq9A00	1.10.287.2500	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.51	37.0	3.53e-01	82.0%	94.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4003919	109.54.1.14 ↗	alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › DUF7951	0.66	54.0	3.77e-01	95.1%	30.2%
3845485	109.4.1.1891 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_16	0.65	54.0	3.45e-01	95.1%	24.0%
136703	3808.1.1.1 ↗	alpha arrays › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Ca_bind_SSO6904	0.62	43.0	3.76e-01	73.8%	88.9%
3998059	2004.1.1.23 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom	0.54	45.0	3.35e-01	98.4%	38.3%

D2 medium residues 1-86_176-191

PDB

Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02123.22 best	RdRP_4	24.5	1.80e-05	71.6%	10.8%

D3 medium residues 87-98_136-175

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3dd9D02	6.10.140.2060	Special › Helix non-globular › Helix Hairpins ›	0.76	53.0	5.77e-01	73.1%	92.7%
3ddhA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.67	57.0	5.03e-01	100.0%	84.0%
3tixB03	3.40.50.11490	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.61	48.0	3.58e-01	92.3%	43.0%
1ad6A00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.59	50.0	3.42e-01	96.2%	61.1%
2xokP00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.57	39.0	3.65e-01	76.9%	59.5%
2vj4A01	1.10.10.2060	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.55	45.0	3.83e-01	94.2%	62.2%
2nyvA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.53	43.0	4.15e-01	98.1%	82.8%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3243667	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.56	43.0	3.86e-01	88.5%	81.2%
3818741	145.1.1.1 ↗	alpha arrays › F-box domain › F-box domain › F-box domain › F-box	0.54	40.0	3.93e-01	100.0%	75.0%

D4 medium residues 99-135_192-275

PDB

Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181