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hypothetical_protein_2

Euk-Vir

Shahe_arthropod_virus_1

hypothetical_protein_2__YP_009333166__Shahe_arthropod_virus_1__1923409

Identity

Accession:
YP_009333166 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

53.3 mean pLDDT

Taxonomy

Shahe_arthropod_virus_1

TaxID: 1923409

Cluster

View cluster (173 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 100-268
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
D2 medium residues 425-443_488-522_549-596
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009336782__Changjiang_picorna-like_virus_13__1922786__D353-376_416-458_483-522
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 5.33e-01 100.0% 58.2%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 73.0 5.23e-01 100.0% 62.7%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 5.25e-01 100.0% 63.8%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 66.0 4.87e-01 100.0% 58.7%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 66.0 5.00e-01 100.0% 64.5%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 4.72e-01 100.0% 64.2%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 65.0 4.76e-01 100.0% 53.9%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 4.84e-01 100.0% 61.4%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 63.0 4.78e-01 100.0% 62.4%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 63.0 4.71e-01 100.0% 58.8%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 4.66e-01 100.0% 56.7%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 4.57e-01 100.0% 69.0%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 4.69e-01 100.0% 60.0%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 62.0 4.50e-01 100.0% 55.7%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 61.0 4.88e-01 100.0% 81.1%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 62.0 4.71e-01 100.0% 62.2%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 62.0 4.90e-01 100.0% 68.9%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 62.0 4.80e-01 100.0% 66.3%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 61.0 4.56e-01 100.0% 57.9%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 61.0 4.80e-01 100.0% 73.3%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 60.0 4.61e-01 100.0% 60.1%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 60.0 4.27e-01 100.0% 57.3%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 59.0 4.80e-01 100.0% 83.2%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 58.0 4.52e-01 100.0% 70.5%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 58.0 4.83e-01 100.0% 88.6%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.61 56.0 4.40e-01 100.0% 67.8%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 45.0 4.06e-01 93.1% 96.5%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2099164 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 76.0 5.33e-01 100.0% 58.2%
2726763 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 75.0 5.29e-01 100.0% 64.6%
1405130 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 73.0 5.26e-01 100.0% 63.8%
2982737 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.76 72.0 5.06e-01 100.0% 62.9%
2044958 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 69.0 4.98e-01 100.0% 61.8%
2440135 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.72 68.0 5.08e-01 100.0% 68.1%
1489398 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 67.0 4.87e-01 100.0% 57.5%
2439648 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.70 68.0 4.76e-01 100.0% 60.8%
1933849 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.70 66.0 4.99e-01 100.0% 63.7%
2044957 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 65.0 4.75e-01 100.0% 62.4%
2414126 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.69 66.0 4.80e-01 100.0% 53.5%
1697855 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.69 65.0 4.76e-01 100.0% 53.9%
2983138 10.2.1.88 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.68 64.0 4.74e-01 100.0% 58.4%
2982483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 64.0 4.72e-01 100.0% 58.6%
169772 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 63.0 4.71e-01 100.0% 58.8%
4872939 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.68 64.0 4.90e-01 100.0% 64.6%
2100469 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.68 63.0 4.59e-01 100.0% 64.5%
2099173 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.67 62.0 4.48e-01 100.0% 70.1%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.67 63.0 4.69e-01 100.0% 60.0%
1867996 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.66 62.0 4.48e-01 100.0% 52.5%
1400716 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.66 62.0 4.71e-01 100.0% 62.2%
2793614 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.65 62.0 4.70e-01 100.0% 62.1%
3075118 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.64 59.0 4.29e-01 100.0% 67.9%
4814721 10.2.1.13 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.64 59.0 4.64e-01 100.0% 63.9%
4882965 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.63 59.0 5.15e-01 100.0% 74.8%
2982736 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.62 56.0 4.25e-01 100.0% 60.3%
328688 10.2.1.7 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.61 56.0 4.40e-01 100.0% 67.8%
2330242 10.2.1.24 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.61 56.0 4.59e-01 100.0% 74.3%
3601304 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.55 49.0 3.48e-01 100.0% 82.8%
3254899 10.32.1.3 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.51 47.0 4.14e-01 100.0% 77.9%
3701864 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.51 47.0 3.36e-01 100.0% 85.5%
5056566 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.50 45.0 3.55e-01 100.0% 50.2%
D3 medium residues 759-828_916-967_981-1028
PDB