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hypothetical_protein_2

Euk-Vir

Beihai_shrimp_virus_1

hypothetical_protein_2__YP_009333495__Beihai_shrimp_virus_1__1922667

Identity

Accession:
YP_009333495 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

58.1 mean pLDDT

Taxonomy

TaxID: 1922667

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-219
PDB
CATH (85)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 78.0 6.94e-01 100.0% 68.4%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 73.0 6.90e-01 100.0% 73.4%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.88 78.0 6.87e-01 100.0% 67.1%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 77.0 7.01e-01 100.0% 72.7%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.87 75.0 7.03e-01 100.0% 76.0%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 69.0 7.34e-01 100.0% 95.7%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 74.0 7.26e-01 100.0% 88.7%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 70.0 6.92e-01 100.0% 85.5%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 71.0 6.62e-01 100.0% 76.8%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 69.0 6.68e-01 100.0% 81.7%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 68.0 6.88e-01 100.0% 88.6%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 77.0 6.79e-01 100.0% 80.8%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 67.0 7.06e-01 100.0% 97.0%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 71.0 6.38e-01 100.0% 71.0%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 76.0 6.67e-01 100.0% 75.8%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 70.0 6.54e-01 100.0% 78.2%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 75.0 6.33e-01 100.0% 67.5%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.78 41.0 5.41e-01 91.4% 91.3%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 7.31e-01 100.0% 100.0%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 65.0 5.51e-01 100.0% 57.0%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 70.0 6.48e-01 100.0% 78.3%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 66.0 7.02e-01 94.6% 100.0%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 63.0 5.09e-01 95.7% 46.8%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 65.0 6.80e-01 98.9% 96.4%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 73.0 6.26e-01 100.0% 75.0%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 73.0 6.52e-01 100.0% 76.0%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 69.0 7.02e-01 100.0% 96.7%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 6.16e-01 100.0% 69.1%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 70.0 6.96e-01 100.0% 94.7%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 67.0 6.26e-01 100.0% 77.9%
1cwpA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.75 53.0 5.92e-01 100.0% 89.9%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 72.0 6.29e-01 100.0% 74.2%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 63.0 5.07e-01 97.3% 47.4%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 69.0 6.30e-01 100.0% 76.6%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 67.0 6.85e-01 100.0% 97.2%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 67.0 5.94e-01 100.0% 68.1%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.74 57.0 5.66e-01 98.4% 76.8%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 66.0 6.35e-01 100.0% 83.7%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 67.0 6.22e-01 100.0% 77.8%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 58.0 5.83e-01 100.0% 81.0%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 69.0 6.27e-01 100.0% 77.3%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 58.0 5.86e-01 100.0% 83.6%
5jzgA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 62.0 5.75e-01 100.0% 73.5%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 68.0 6.19e-01 100.0% 78.2%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 66.0 6.19e-01 100.0% 81.9%
1pgw200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 63.0 5.05e-01 100.0% 50.1%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 63.0 6.41e-01 100.0% 94.6%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.71 37.0 4.70e-01 90.3% 83.3%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.70 46.0 5.23e-01 98.9% 86.1%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 6.15e-01 100.0% 83.9%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 6.19e-01 100.0% 85.8%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 66.0 6.20e-01 100.0% 87.4%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 66.0 5.70e-01 100.0% 69.2%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 65.0 5.65e-01 100.0% 79.6%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.68 58.0 6.08e-01 98.4% 98.8%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 5.76e-01 100.0% 78.0%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 6.35e-01 100.0% 100.0%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 5.56e-01 100.0% 78.5%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 5.94e-01 100.0% 85.3%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 5.58e-01 100.0% 84.9%
1s58A00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.66 61.0 4.41e-01 100.0% 87.0%
1c8dA00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.66 61.0 4.35e-01 100.0% 89.6%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 53.0 5.64e-01 98.9% 95.8%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 37.0 4.78e-01 96.8% 99.0%
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 60.0 5.63e-01 98.4% 95.1%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 53.0 5.60e-01 98.9% 96.9%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.64 41.0 4.22e-01 94.1% 66.5%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 5.31e-01 97.8% 95.4%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 5.60e-01 98.9% 91.5%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 58.0 4.90e-01 100.0% 75.4%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 44.0 5.09e-01 98.9% 100.0%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 57.0 5.02e-01 100.0% 68.6%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.57 37.0 4.44e-01 98.9% 97.6%
4bz4A00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.98e-01 94.6% 95.5%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 4.64e-01 97.8% 100.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 4.76e-01 97.3% 93.1%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 4.78e-01 95.2% 91.4%
2xbzA00 2.60.40.2380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 4.24e-01 89.8% 95.5%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 4.73e-01 96.2% 98.2%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 42.0 4.56e-01 96.8% 98.1%
3seeA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 46.0 4.43e-01 93.0% 100.0%
2zxqA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 4.51e-01 94.6% 97.5%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.52 40.0 4.39e-01 94.1% 100.0%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.52 45.0 4.04e-01 95.2% 77.7%
1nlrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.51 43.0 4.14e-01 93.5% 94.1%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4882965 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.90 62.0 6.96e-01 95.2% 87.8%
140027 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.88 78.0 6.94e-01 100.0% 68.4%
1211 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.88 78.0 6.87e-01 100.0% 67.1%
1949032 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.87 77.0 7.01e-01 100.0% 72.7%
1400716 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.87 75.0 7.03e-01 100.0% 76.0%
1867996 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 74.0 6.43e-01 100.0% 63.5%
1693524 10.2.1.49 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.85 69.0 7.03e-01 100.0% 86.2%
2721878 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 80.0 7.09e-01 100.0% 75.6%
1264422 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 74.0 6.98e-01 100.0% 79.0%
2982736 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 74.0 6.71e-01 100.0% 72.6%
4814721 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.83 70.0 6.79e-01 100.0% 80.7%
2505858 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.82 68.0 6.64e-01 98.9% 80.2%
2793614 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 70.0 6.67e-01 100.0% 77.1%
4888111 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 69.0 6.89e-01 100.0% 85.7%
2579093 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 73.0 6.69e-01 100.0% 74.5%
4872939 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 71.0 6.83e-01 100.0% 80.9%
1696117 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 69.0 6.95e-01 100.0% 88.6%
3075118 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 78.0 6.77e-01 100.0% 79.0%
2099184 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.81 77.0 6.40e-01 100.0% 72.7%
4900996 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.80 58.0 5.89e-01 82.3% 74.5%
1693517 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.80 69.0 6.70e-01 100.0% 82.5%
1693522 10.2.1.49 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.80 68.0 6.86e-01 100.0% 88.1%
2726763 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 77.0 6.53e-01 100.0% 75.7%
1724852 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.80 67.0 7.04e-01 100.0% 96.4%
2389609 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 74.0 6.72e-01 100.0% 75.3%
1697855 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 71.0 6.38e-01 100.0% 71.0%
4768609 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 76.0 6.57e-01 100.0% 79.3%
2044957 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 76.0 6.75e-01 100.0% 74.4%
1933849 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 70.0 6.53e-01 100.0% 77.1%
2099173 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.79 75.0 6.52e-01 100.0% 81.7%
2414126 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.79 71.0 6.39e-01 100.0% 72.2%
1841617 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 75.0 6.65e-01 100.0% 74.6%
2100469 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 75.0 6.60e-01 100.0% 76.6%
2441244 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.78 72.0 6.71e-01 100.0% 80.9%
5060870 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 44.0 5.85e-01 94.1% 100.0%
2589532 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.77 71.0 7.05e-01 100.0% 92.8%
2542980 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.77 65.0 6.45e-01 98.9% 85.3%
139106 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 69.0 6.46e-01 100.0% 78.3%
140024 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 73.0 6.26e-01 100.0% 75.0%
1405130 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 73.0 6.52e-01 100.0% 76.0%
2330242 10.2.1.24 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.76 64.0 6.48e-01 97.8% 89.1%
2982483 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 72.0 6.52e-01 100.0% 77.2%
146646 10.2.1.30 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.76 69.0 6.88e-01 100.0% 92.2%
2099164 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.76 72.0 6.16e-01 100.0% 69.1%
3344591 10.2.1.81 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP 0.76 56.0 5.47e-01 100.0% 69.3%
2982737 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.75 72.0 6.17e-01 100.0% 73.7%
1687952 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 67.0 6.26e-01 100.0% 77.9%
1949031 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 72.0 6.29e-01 100.0% 74.2%
3314257 10.32.1.193 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP 0.75 56.0 5.75e-01 99.5% 81.1%
2044958 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 70.0 6.26e-01 100.0% 74.0%
2983138 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.74 69.0 6.30e-01 100.0% 76.9%
328688 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.74 66.0 6.35e-01 100.0% 83.7%
2579094 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.74 70.0 6.17e-01 100.0% 73.9%
2440135 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.74 70.0 6.50e-01 100.0% 81.2%
1489398 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 70.0 6.25e-01 100.0% 74.9%
31099 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 67.0 6.22e-01 100.0% 77.8%
2439648 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.74 70.0 6.04e-01 100.0% 71.8%
1405131 10.2.1.51 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.74 67.0 5.84e-01 100.0% 67.3%
1758310 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.73 65.0 6.31e-01 100.0% 84.8%
3392335 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.73 51.0 5.62e-01 97.3% 88.0%
1945727 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 69.0 6.09e-01 100.0% 73.3%
169772 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.72 68.0 6.19e-01 100.0% 78.2%
2048473 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 67.0 5.96e-01 100.0% 81.0%
1233 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.71 64.0 6.44e-01 100.0% 94.2%
1866058 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.71 63.0 6.41e-01 100.0% 94.6%
1219 10.2.1.24 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.71 63.0 6.35e-01 100.0% 93.6%
2440134 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 56.0 5.59e-01 100.0% 80.9%
5040310 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 44.0 5.48e-01 92.5% 100.0%
289259 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.70 66.0 6.19e-01 100.0% 86.7%
143449 10.2.1.34 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.70 60.0 6.19e-01 100.0% 95.5%
1215 10.2.1.34 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.70 59.0 6.16e-01 100.0% 96.5%
1234 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.70 65.0 6.45e-01 100.0% 95.3%
1232 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.69 65.0 6.43e-01 100.0% 95.4%
1886797 10.2.1.69 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.68 64.0 5.73e-01 100.0% 73.9%
3926732 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.67 43.0 4.75e-01 95.2% 78.0%
148379 10.2.1.69 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.67 63.0 5.30e-01 100.0% 62.3%
1213 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.67 63.0 5.56e-01 100.0% 78.5%
1444532 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.67 63.0 5.94e-01 100.0% 85.3%
169770 10.2.1.69 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.67 63.0 5.58e-01 100.0% 84.9%
3596404 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.67 40.0 5.06e-01 91.9% 100.0%
3519566 10.32.1.230 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.65 44.0 5.13e-01 95.7% 95.6%
3282993 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.64 46.0 5.09e-01 96.8% 92.0%
3593967 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 40.0 4.85e-01 89.8% 100.0%
1852013 11.1.5.40 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › BNR_assoc_N 0.62 48.0 5.05e-01 97.3% 89.3%
5046043 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 36.0 4.08e-01 97.8% 77.0%
185776 10.2.1.52 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › DUF4621 0.60 49.0 5.29e-01 96.2% 100.0%
3751376 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.55 43.0 4.64e-01 97.8% 96.1%
4981915 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 46.0 4.86e-01 93.0% 100.0%
3278369 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.54 48.0 4.48e-01 96.8% 99.1%
5033447 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.54 48.0 4.60e-01 96.2% 97.6%
5053199 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.53 48.0 4.59e-01 97.3% 99.5%
1160 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.53 48.0 4.60e-01 97.8% 99.1%
3704589 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.53 48.0 4.76e-01 97.8% 100.0%
4477054 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.53 47.0 4.42e-01 94.6% 100.0%
5041422 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.52 48.0 4.77e-01 98.4% 95.8%
D2 high residues 271-453
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00073.27 best Rhv 24.0 3.80e-05 81.4% 56.7%
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 82.0 7.11e-01 100.0% 73.5%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 82.0 6.93e-01 100.0% 73.9%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 70.0 6.51e-01 100.0% 72.0%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 71.0 6.70e-01 100.0% 74.7%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 74.0 6.63e-01 100.0% 70.1%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 74.0 6.91e-01 100.0% 77.3%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 80.0 7.09e-01 100.0% 74.8%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 80.0 6.71e-01 100.0% 68.1%
7dodB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 70.0 6.91e-01 100.0% 83.4%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 71.0 6.63e-01 100.0% 75.0%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 70.0 6.74e-01 100.0% 80.2%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 72.0 6.53e-01 100.0% 71.9%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 75.0 6.91e-01 100.0% 77.4%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 71.0 6.34e-01 100.0% 67.6%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 58.0 6.76e-01 95.6% 100.0%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 6.27e-01 100.0% 66.3%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 75.0 6.82e-01 100.0% 77.0%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.65e-01 100.0% 74.6%
2xbzA00 2.60.40.2380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.79 43.0 5.02e-01 92.3% 73.5%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 76.0 6.79e-01 100.0% 76.4%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.68e-01 100.0% 75.7%
5aca300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 70.0 6.53e-01 100.0% 77.0%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 75.0 6.78e-01 100.0% 77.3%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 69.0 6.76e-01 100.0% 87.2%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.77 41.0 5.36e-01 92.3% 91.3%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 69.0 6.00e-01 100.0% 66.9%
1pgw200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 68.0 5.40e-01 100.0% 50.4%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 64.0 5.07e-01 98.4% 47.4%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 63.0 6.32e-01 100.0% 87.5%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 6.18e-01 100.0% 79.6%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 5.92e-01 100.0% 66.8%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 61.0 6.41e-01 100.0% 95.8%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 66.0 6.55e-01 100.0% 93.7%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 68.0 5.83e-01 100.0% 78.8%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 5.79e-01 100.0% 67.8%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.72 67.0 6.74e-01 100.0% 98.9%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 64.0 5.13e-01 100.0% 50.9%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 68.0 5.93e-01 100.0% 77.7%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 60.0 5.07e-01 100.0% 56.3%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 68.0 6.66e-01 100.0% 99.0%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 56.0 5.55e-01 100.0% 79.4%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 65.0 6.07e-01 100.0% 80.5%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 63.0 6.36e-01 100.0% 95.7%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.70 41.0 4.91e-01 94.0% 88.0%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 55.0 5.52e-01 100.0% 82.0%
6aj3B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.70 61.0 6.38e-01 95.6% 100.0%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 62.0 6.31e-01 100.0% 96.6%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 58.0 6.04e-01 99.5% 95.9%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 62.0 5.93e-01 100.0% 82.5%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 65.0 5.58e-01 100.0% 68.5%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 64.0 5.98e-01 100.0% 87.8%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 63.0 5.58e-01 100.0% 83.3%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.67 45.0 4.95e-01 100.0% 85.4%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 62.0 5.79e-01 100.0% 83.0%
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 62.0 5.81e-01 100.0% 85.7%
3dkqA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.64 38.0 3.89e-01 96.7% 58.2%
4devD01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 42.0 4.98e-01 98.9% 98.4%
4h3wA02 2.60.120.1260 Mainly Beta › Sandwich › Jelly Rolls › 0.62 47.0 5.09e-01 98.9% 94.1%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 55.0 4.58e-01 100.0% 80.1%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.59 43.0 4.88e-01 100.0% 100.0%
4zchA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 39.0 4.53e-01 96.2% 100.0%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.56 42.0 4.59e-01 96.2% 97.2%
4ht1T00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 39.0 4.54e-01 99.5% 100.0%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 44.0 4.74e-01 98.9% 98.7%
1oh4A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 46.0 4.78e-01 98.9% 96.6%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.54 39.0 4.40e-01 97.8% 100.0%
4mxwD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 38.0 4.33e-01 98.9% 100.0%
4hsaF02 2.60.40.2150 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 0.53 30.0 3.80e-01 86.3% 95.2%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 43.0 4.60e-01 97.8% 98.2%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 41.0 4.41e-01 98.4% 98.1%
1kxgA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 39.0 4.34e-01 98.4% 100.0%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 40.0 4.40e-01 98.9% 100.0%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 4.40e-01 98.9% 93.7%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 4.45e-01 96.2% 93.7%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2099184 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.86 83.0 6.84e-01 100.0% 71.7%
2726763 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.86 83.0 6.99e-01 100.0% 74.3%
1949031 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 82.0 7.11e-01 100.0% 73.5%
4882965 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 60.0 6.66e-01 97.8% 89.1%
140024 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.85 82.0 6.93e-01 100.0% 73.9%
2579094 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.84 81.0 7.05e-01 100.0% 73.2%
4888111 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.84 71.0 7.00e-01 100.0% 84.1%
1400716 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.84 71.0 6.70e-01 100.0% 74.7%
1696117 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.83 70.0 7.04e-01 100.0% 86.4%
2044958 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 80.0 7.03e-01 100.0% 73.2%
2505858 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.83 69.0 6.74e-01 100.0% 79.7%
1933849 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 75.0 6.89e-01 100.0% 76.2%
1697855 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 74.0 6.63e-01 100.0% 70.1%
2099164 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 80.0 6.71e-01 100.0% 68.1%
1405130 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.83 80.0 7.09e-01 100.0% 74.8%
2440135 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 79.0 7.24e-01 100.0% 79.9%
4814721 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 69.0 6.67e-01 100.0% 78.7%
2793614 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 70.0 6.59e-01 100.0% 75.2%
2982737 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.82 79.0 6.70e-01 100.0% 73.0%
1693517 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.82 70.0 6.77e-01 100.0% 81.0%
1949032 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 72.0 6.53e-01 100.0% 71.9%
1945727 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.82 79.0 6.88e-01 100.0% 72.2%
1867996 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 71.0 6.14e-01 100.0% 62.7%
2414126 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.81 74.0 6.62e-01 100.0% 71.4%
4900996 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.81 59.0 5.92e-01 87.4% 73.4%
140027 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 71.0 6.34e-01 100.0% 67.6%
4872939 10.2.1.13 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat 0.81 70.0 6.68e-01 100.0% 78.9%
1694889 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.81 63.0 5.97e-01 100.0% 69.3%
139106 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.81 74.0 6.83e-01 100.0% 77.4%
1211 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 72.0 6.27e-01 100.0% 66.3%
31099 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 75.0 6.82e-01 100.0% 77.0%
2439648 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 77.0 6.59e-01 100.0% 71.1%
2982483 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 77.0 6.88e-01 100.0% 76.4%
2983138 10.2.1.88 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat 0.80 76.0 6.86e-01 100.0% 76.1%
2440134 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.79 63.0 6.23e-01 100.0% 79.8%
1687952 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 70.0 6.53e-01 100.0% 77.0%
169772 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 75.0 6.78e-01 100.0% 77.3%
1489398 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 75.0 6.67e-01 100.0% 74.1%
2044957 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 75.0 6.59e-01 100.0% 73.2%
5041250 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.78 45.0 5.87e-01 96.7% 100.0%
2389609 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 72.0 6.48e-01 100.0% 74.1%
1264422 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.78 69.0 6.45e-01 100.0% 77.6%
4978630 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 43.0 5.72e-01 92.3% 100.0%
1841617 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.77 74.0 6.50e-01 100.0% 73.4%
1219 10.2.1.24 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP 0.77 68.0 6.81e-01 100.0% 91.5%
2579093 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.76 67.0 6.15e-01 100.0% 73.6%
143448 10.2.1.38 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.75 63.0 6.61e-01 96.7% 96.4%
2982736 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 67.0 6.05e-01 100.0% 71.7%
2721878 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 72.0 6.35e-01 100.0% 74.8%
1405131 10.2.1.51 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP 0.75 68.0 5.91e-01 100.0% 66.2%
2100469 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 71.0 6.24e-01 100.0% 75.0%
2099173 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.75 71.0 6.12e-01 100.0% 80.2%
1214 10.2.1.38 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N 0.74 64.0 6.55e-01 98.4% 93.8%
1693522 10.2.1.49 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN 0.74 63.0 6.30e-01 100.0% 87.0%
2579092 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 70.0 6.10e-01 100.0% 79.0%
1841618 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.74 71.0 6.26e-01 100.0% 78.6%
1724852 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.74 61.0 6.39e-01 100.0% 95.2%
4768609 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 70.0 6.01e-01 100.0% 78.5%
2048473 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.73 70.0 6.19e-01 100.0% 80.2%
1215 10.2.1.34 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.73 62.0 6.40e-01 100.0% 94.8%
3075118 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.73 69.0 6.03e-01 100.0% 78.2%
140026 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.72 67.0 5.79e-01 100.0% 67.8%
143449 10.2.1.34 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat 0.71 64.0 6.55e-01 100.0% 98.3%
1213 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 68.0 5.93e-01 100.0% 77.7%
3624575 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.71 44.0 5.30e-01 95.6% 92.5%
2389608 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 68.0 6.05e-01 100.0% 78.2%
2006903 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.70 65.0 5.58e-01 100.0% 64.3%
3742116 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.70 43.0 5.37e-01 96.7% 98.3%
1121 10.32.1.35 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › YpM 0.70 41.0 4.91e-01 94.0% 88.0%
148379 10.2.1.69 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.69 65.0 5.39e-01 100.0% 61.3%
169770 10.2.1.69 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.67 63.0 5.58e-01 100.0% 83.3%
1444532 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.66 62.0 5.81e-01 100.0% 85.7%
1412423 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.65 43.0 5.14e-01 97.3% 96.9%
3949550 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.60 39.0 4.23e-01 95.1% 78.7%
3953596 10.32.1.242 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_AftD 0.60 39.0 3.99e-01 95.1% 67.4%
4197908 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 38.0 3.81e-01 95.1% 61.6%
3936599 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.58 44.0 4.85e-01 98.4% 98.6%
3830260 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 38.0 2.71e-01 96.2% 21.9%
5004661 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 45.0 4.82e-01 96.2% 100.0%
3805853 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.55 44.0 4.34e-01 97.3% 78.5%
2523954 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.54 42.0 4.48e-01 98.9% 94.9%
4012587 10.32.1.232 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 0.53 46.0 4.82e-01 99.5% 100.0%
3223309 11.1.1.934 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N, Arrestin_C 0.52 34.0 3.02e-01 98.4% 42.5%
4980390 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 4.04e-01 91.3% 99.1%
4639307 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 44.0 4.45e-01 97.3% 93.3%
D3 medium residues 511-530_565-714
PDB