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hypothetical_protein_2

Euk-Vir

Hubei_toti-like_virus_12

hypothetical_protein_2__YP_009336693__Hubei_toti-like_virus_12__1923300

Identity

Accession:
YP_009336693 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

61.8 mean pLDDT

Taxonomy

Orthornavirae› Duplornaviricota› Chrymotiviricetes› Ghabrivirales› Inseviridae› Insevirus› Hubei_toti-like_virus_12

TaxID: 1923300

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 158-256
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.58 40.0 3.57e-01 72.7% 95.9%
2irmA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.57 41.0 2.86e-01 74.7% 52.2%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.56 40.0 3.85e-01 74.7% 100.0%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.56 34.0 3.68e-01 74.7% 72.8%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.56 39.0 4.21e-01 76.8% 92.3%
1ujnA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.52 38.0 3.31e-01 78.8% 66.7%
3he0B00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 35.0 2.92e-01 70.7% 71.9%
3u4qA02 1.10.274.50 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.50 37.0 3.29e-01 78.8% 70.7%
2de2A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 37.0 3.00e-01 77.8% 93.3%
1jliA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.50 36.0 3.53e-01 77.8% 67.9%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995419 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.65 45.0 4.86e-01 73.7% 82.4%
3690692 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 41.0 3.03e-01 78.8% 82.1%
4374650 601.54.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.54 42.0 3.68e-01 84.8% 69.0%
4303951 601.54.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.54 42.0 3.91e-01 84.8% 85.6%
3710910 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 40.0 2.99e-01 81.8% 55.9%
3564445 101.1.10.6 ↗ alpha arrays › HTH › HTH › Cyclin-like › RB_A 0.52 39.0 3.15e-01 80.8% 94.8%
3678787 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 38.0 2.82e-01 77.8% 41.9%
D2 medium residues 257-284_343-382_411-465
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase__YP_009143529__Sclerotinia_sclerotiorum_megabirnavirus_1__1661257__D510-583_640-668
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 26.0 3.01e-01 73.2% 55.3%
1udxA03 3.30.300.350 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › GTP-binding protein OBG, C-terminal domain 0.56 30.0 3.69e-01 77.2% 85.1%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 26.0 2.83e-01 75.6% 51.9%
1m56C02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.52 38.0 3.23e-01 74.8% 94.4%
4g84A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 38.0 2.86e-01 77.2% 40.2%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3637098 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 27.0 2.65e-01 75.6% 41.4%
3485296 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 27.0 2.91e-01 75.6% 52.4%
3603208 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 26.0 3.47e-01 75.6% 78.6%
4224821 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.57 27.0 2.82e-01 75.6% 47.8%
3228583 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.55 25.0 2.66e-01 71.5% 47.0%
3234976 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.55 26.0 2.77e-01 75.6% 50.0%
3712081 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.55 25.0 2.71e-01 71.5% 49.1%
3270487 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.53 25.0 2.72e-01 73.2% 51.8%
4259368 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.51 26.0 2.63e-01 75.6% 48.3%
3965667 109.4.1.520 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HemY_N 0.51 30.0 2.09e-01 82.9% 17.0%
4381440 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.51 25.0 2.63e-01 75.6% 50.4%
4776306 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.51 31.0 2.77e-01 99.2% 41.3%
5035493 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.51 25.0 2.73e-01 75.6% 55.2%
4083451 192.2.1.20 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP 0.50 25.0 3.10e-01 75.6% 75.0%
D3 medium residues 285-342
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009336780__Hubei_toti-like_virus_13__1923301__D59-115
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2rt6A00 1.20.1270.340 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 43.0 3.79e-01 91.4% 78.6%
3gg7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 37.0 2.50e-01 79.3% 36.2%
1xp8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.51 38.0 3.80e-01 81.0% 93.3%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3419004 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 44.0 2.75e-01 75.9% 15.1%
None — 0.61 43.0 2.45e-01 75.9% 7.6%
5059636 7584.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.57 45.0 3.24e-01 89.7% 47.8%
3691078 109.4.1.194 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.55 47.0 2.85e-01 100.0% 23.4%
5080196 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.54 40.0 2.82e-01 82.8% 45.5%
5008330 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.54 42.0 3.22e-01 89.7% 55.5%
4958853 1076.1.1.1 ↗ alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like 0.54 45.0 2.99e-01 100.0% 76.7%
3350669 502.1.1.1 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.53 40.0 3.77e-01 81.0% 75.7%
3274079 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 36.0 2.26e-01 70.7% 14.1%
3354127 502.1.1.0 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain 0.53 38.0 3.85e-01 79.3% 91.7%
5041165 7584.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.52 41.0 3.02e-01 91.4% 49.1%
3246611 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.52 34.0 2.18e-01 72.4% 12.3%
3618097 101.1.11.0 ↗ alpha arrays › HTH › HTH › Ribbon-helix-helix 0.52 35.0 3.54e-01 72.4% 73.3%
1488294 205.1.1.21 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_16 0.51 32.0 2.87e-01 98.3% 40.2%
3421663 502.1.1.1 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.51 39.0 3.67e-01 82.8% 80.0%
3738285 213.1.1.62 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C 0.50 40.0 2.57e-01 91.4% 51.8%
3644530 502.1.1.1 ↗ a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C 0.50 39.0 3.90e-01 86.2% 96.7%
D4 medium residues 383-410_466-546
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hkqA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.75 68.0 6.21e-01 100.0% 81.9%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 47.0 5.73e-01 78.9% 100.0%
1ra6A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.73 60.0 6.10e-01 86.2% 100.0%
1hi8A03 3.30.70.1600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 68.0 5.71e-01 100.0% 91.5%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 48.0 5.71e-01 78.9% 100.0%
1lfpA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.73 47.0 5.56e-01 83.5% 97.3%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 47.0 5.57e-01 72.5% 98.6%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.70 57.0 6.02e-01 93.6% 100.0%
3h5xA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.70 65.0 6.35e-01 99.1% 100.0%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.70 42.0 5.17e-01 71.6% 98.5%
4ol8A01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.69 62.0 5.80e-01 99.1% 80.7%
1konA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.68 45.0 5.16e-01 86.2% 96.0%
7ahbB01 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.68 38.0 4.82e-01 71.6% 100.0%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.68 47.0 5.40e-01 82.6% 100.0%
3ofgB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 51.0 5.60e-01 83.5% 98.9%
2c5sA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.67 54.0 4.65e-01 85.3% 89.3%
1utaA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.67 44.0 5.09e-01 80.7% 94.8%
4oi3A00 3.30.70.3090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer 0.67 48.0 5.36e-01 82.6% 100.0%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.67 43.0 5.14e-01 83.5% 98.6%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.67 51.0 5.11e-01 79.8% 87.2%
2fyxA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.65 52.0 4.96e-01 86.2% 85.4%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.65 46.0 5.24e-01 82.6% 100.0%
2hiyA01 3.30.70.1280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SP0830-like domains 0.65 49.0 5.31e-01 85.3% 97.7%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.64 42.0 4.92e-01 78.9% 96.1%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.64 52.0 4.57e-01 88.1% 88.4%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 45.0 5.08e-01 79.8% 100.0%
1weyA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 47.0 4.84e-01 84.4% 81.7%
1r6vA02 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.63 39.0 4.50e-01 78.9% 85.9%
1fjeB01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 45.0 5.05e-01 90.8% 100.0%
3gqcC01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.63 50.0 4.62e-01 84.4% 93.4%
1s5jA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.63 55.0 4.94e-01 99.1% 97.5%
2e29A01 3.30.70.2280 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 42.0 4.77e-01 72.5% 97.4%
4er8A00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.62 50.0 4.36e-01 86.2% 87.9%
1qpoA01 3.90.1170.20 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Quinolinate phosphoribosyl transferase, N-terminal domain 0.62 43.0 4.18e-01 70.6% 76.5%
2xhcA01 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.62 46.0 4.85e-01 85.3% 89.5%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.61 42.0 4.64e-01 70.6% 91.8%
2f5gA00 3.30.70.1290 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like 0.61 49.0 4.61e-01 85.3% 86.9%
3i4pA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.61 41.0 4.55e-01 71.6% 90.5%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.61 41.0 3.63e-01 70.6% 47.9%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 47.0 4.60e-01 84.4% 95.0%
2fphX02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.60 45.0 4.88e-01 79.8% 97.7%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.60 49.0 4.25e-01 89.0% 88.9%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.60 39.0 4.57e-01 82.6% 100.0%
4x0qA03 3.30.70.370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 52.0 4.74e-01 95.4% 95.8%
1u7lA03 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 42.0 4.55e-01 77.1% 88.9%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 50.0 5.01e-01 92.7% 97.3%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.59 46.0 4.66e-01 82.6% 98.1%
2g4bA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 45.0 4.78e-01 83.5% 95.7%
6w72A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 4.31e-01 85.3% 96.2%
4pcqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.57 42.0 4.67e-01 78.0% 100.0%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 37.0 3.83e-01 71.6% 68.9%
1x0pA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 42.0 4.49e-01 84.4% 89.6%
4lvnP00 3.30.70.2380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 40.0 4.53e-01 84.4% 98.8%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 43.0 4.45e-01 82.6% 90.3%
3tmaA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.56 44.0 3.96e-01 85.3% 94.2%
2zbiA02 3.30.70.2120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 4.31e-01 85.3% 99.1%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 42.0 4.49e-01 86.2% 98.9%
4w1vA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 39.0 3.50e-01 76.1% 89.9%
3n89A02 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.53 42.0 3.93e-01 85.3% 87.6%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 4.43e-01 85.3% 98.9%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1893002 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.76 69.0 5.23e-01 100.0% 59.4%
4959113 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.75 45.0 5.61e-01 70.6% 100.0%
3571315 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.74 67.0 5.20e-01 100.0% 64.3%
4980798 304.120.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.73 49.0 5.79e-01 78.9% 100.0%
4118092 304.28.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.73 49.0 5.73e-01 70.6% 100.0%
1036625 3122.1.1.1 ↗ a+b complex topology › MESD › MESD › MESD › Mesd 0.73 51.0 5.79e-01 81.7% 100.0%
4209732 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.73 52.0 5.49e-01 73.4% 100.0%
3601206 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.72 49.0 5.73e-01 73.4% 100.0%
4031829 304.120.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.72 50.0 5.65e-01 71.6% 97.5%
4525621 304.120.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.71 49.0 5.36e-01 71.6% 86.7%
3916504 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.71 55.0 4.16e-01 82.6% 53.3%
3790536 3122.1.1.1 ↗ a+b complex topology › MESD › MESD › MESD › Mesd 0.70 49.0 5.07e-01 71.6% 80.0%
3509710 3122.1.1.1 ↗ a+b complex topology › MESD › MESD › MESD › Mesd 0.70 47.0 4.57e-01 71.6% 60.8%
3390248 304.117.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.69 48.0 5.49e-01 81.7% 97.5%
3619798 3122.1.1.1 ↗ a+b complex topology › MESD › MESD › MESD › Mesd 0.69 49.0 4.64e-01 73.4% 84.6%
4033172 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.69 45.0 5.06e-01 70.6% 88.7%
5000281 304.55.2.0 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.68 48.0 5.30e-01 72.5% 100.0%
3269598 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.68 47.0 5.36e-01 83.5% 97.5%
4940473 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.68 53.0 5.72e-01 83.5% 100.0%
4115819 304.48.1.48 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.67 56.0 4.87e-01 90.8% 86.5%
4356055 304.120.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.67 45.0 5.21e-01 70.6% 100.0%
3165399 304.8.1.92 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › YggL_50S_bp 0.67 48.0 5.08e-01 74.3% 97.9%
3603014 304.28.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.67 50.0 5.48e-01 83.5% 100.0%
3218110 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.67 45.0 5.26e-01 80.7% 100.0%
3617015 304.120.1.12 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF26955 0.67 50.0 5.50e-01 83.5% 100.0%
5023065 304.28.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.67 48.0 5.26e-01 74.3% 97.6%
4938397 304.117.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.67 43.0 4.98e-01 80.7% 94.7%
5054303 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.67 47.0 5.37e-01 75.2% 100.0%
3893811 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 46.0 4.83e-01 82.6% 78.0%
3392996 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.67 47.0 5.38e-01 84.4% 100.0%
5010510 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.66 46.0 5.26e-01 74.3% 98.8%
4269228 304.122.1.1 ↗ a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 0.66 46.0 4.68e-01 84.4% 71.8%
4956901 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.66 48.0 5.25e-01 75.2% 97.6%
3948373 304.8.1.69 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › YejG 0.66 48.0 4.83e-01 75.2% 79.8%
4316518 304.19.1.1 ↗ a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.66 45.0 4.91e-01 70.6% 100.0%
4316367 304.55.2.7 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f 0.66 52.0 4.23e-01 86.2% 92.1%
3686938 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 49.0 5.42e-01 89.9% 100.0%
3191211 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.65 46.0 5.15e-01 73.4% 100.0%
5043596 304.15.1.0 ↗ a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.65 49.0 4.88e-01 79.8% 87.0%
3626328 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.65 46.0 5.22e-01 86.2% 100.0%
4948615 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.65 52.0 4.73e-01 87.2% 94.0%
4993425 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 50.0 4.08e-01 82.6% 100.0%
4507561 3012.1.1.9 ↗ a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › SecD_1st 0.65 45.0 4.08e-01 72.5% 100.0%
5068786 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.64 52.0 5.49e-01 86.2% 100.0%
4443601 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.64 44.0 4.84e-01 70.6% 100.0%
4164962 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.64 47.0 5.16e-01 78.0% 100.0%
4956505 304.57.1.0 ↗ a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like 0.63 48.0 4.89e-01 78.9% 88.6%
3932127 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 48.0 4.91e-01 84.4% 83.8%
4682115 304.28.1.4 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.63 48.0 5.23e-01 82.6% 97.8%
4385553 304.48.1.48 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 0.63 56.0 4.86e-01 98.2% 83.6%
5260 304.8.1.21 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.63 47.0 4.96e-01 85.3% 90.5%
3400804 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.62 43.0 4.52e-01 71.6% 81.0%
4946181 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.62 50.0 4.86e-01 85.3% 98.3%
4011451 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.62 43.0 4.38e-01 70.6% 100.0%
4022197 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.62 46.0 4.93e-01 85.3% 95.6%
4024918 304.17.1.2 ↗ a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › Spt5-NGN 0.62 49.0 5.20e-01 92.7% 97.9%
4946891 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.62 39.0 4.69e-01 70.6% 100.0%
3550678 304.48.1.10 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS 0.62 51.0 4.24e-01 87.2% 83.3%
3585079 304.24.1.1 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.62 50.0 4.05e-01 87.2% 52.7%
4933530 304.24.1.5 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N 0.61 39.0 4.49e-01 82.6% 92.0%
5116 304.55.2.1 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › Y1_Tnp 0.61 49.0 4.61e-01 85.3% 86.9%
4065099 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.60 43.0 4.59e-01 84.4% 86.3%
3224862 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.60 42.0 4.63e-01 73.4% 100.0%
3633031 304.8.1.73 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › V-ATPase_C 0.59 46.0 4.49e-01 81.7% 97.5%
4098715 304.4.1.7 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Cyclase_polyket 0.59 46.0 4.60e-01 83.5% 96.3%
3288175 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.58 46.0 4.91e-01 94.5% 97.9%
3929751 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.57 40.0 4.46e-01 82.6% 98.8%
1291966 304.7.1.5 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › SUB1_ProdP9 0.57 40.0 4.53e-01 84.4% 98.8%
3735923 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.57 51.0 3.15e-01 98.2% 68.2%
3949144 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.56 43.0 4.58e-01 89.0% 94.7%
4016715 3914.1.1.0 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.56 45.0 2.79e-01 88.1% 69.4%
5058967 304.8.1.4 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.55 37.0 4.28e-01 72.5% 100.0%
3489151 4143.1.1.0 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like 0.54 42.0 3.53e-01 84.4% 90.8%
4133574 304.110.1.4 ↗ a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › UPF0176_N 0.51 40.0 4.15e-01 85.3% 96.0%
D5 medium residues 764-809
PDB