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hypothetical_protein_2
Euk-VirWenling_crustacean_virus_3
hypothetical_protein_2__YP_009336744__Wenling_crustacean_virus_3__1923486
Identity
- Accession:
- YP_009336744 ↗
- Protein ID:
- hypothetical_protein_2
- Kingdom:
- euk
Quality
70.5
mean pLDDT
Cluster
View cluster (173 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 61-253
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00073.27 best | Rhv | 35.9 | 8.60e-09 | 66.8% | 59.7% |
D2
high
residues 844-946
D3
medium
residues 390-590
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
CATH (81)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.90 | 75.0 | 7.29e-01 | 100.0% | 78.2% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.89 | 80.0 | 7.40e-01 | 100.0% | 75.6% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.89 | 86.0 | 7.54e-01 | 100.0% | 74.6% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 74.0 | 7.11e-01 | 100.0% | 78.3% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 69.0 | 7.04e-01 | 100.0% | 84.5% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 69.0 | 6.71e-01 | 100.0% | 75.6% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 81.0 | 7.04e-01 | 100.0% | 68.8% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 68.0 | 6.88e-01 | 100.0% | 81.2% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 74.0 | 6.99e-01 | 100.0% | 77.4% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 70.0 | 6.60e-01 | 100.0% | 72.7% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 71.0 | 6.58e-01 | 100.0% | 71.0% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 69.0 | 6.71e-01 | 100.0% | 76.4% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 66.0 | 6.40e-01 | 100.0% | 72.9% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 70.0 | 6.42e-01 | 100.0% | 68.4% |
| 7chkB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.85 | 55.0 | 6.82e-01 | 95.0% | 100.0% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 71.0 | 6.81e-01 | 100.0% | 77.9% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 73.0 | 6.87e-01 | 100.0% | 76.6% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 78.0 | 7.00e-01 | 100.0% | 74.2% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 75.0 | 7.00e-01 | 100.0% | 78.2% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 75.0 | 6.97e-01 | 100.0% | 77.3% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 68.0 | 6.22e-01 | 100.0% | 67.1% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 62.0 | 6.90e-01 | 100.0% | 95.7% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 68.0 | 5.55e-01 | 100.0% | 49.3% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 65.0 | 6.76e-01 | 100.0% | 88.6% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 69.0 | 6.27e-01 | 100.0% | 67.7% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 75.0 | 6.77e-01 | 100.0% | 75.4% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 66.0 | 6.74e-01 | 100.0% | 88.2% |
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 61.0 | 6.73e-01 | 100.0% | 97.0% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 63.0 | 5.24e-01 | 100.0% | 49.1% |
| 1a6cA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 62.0 | 5.10e-01 | 98.0% | 47.7% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 67.0 | 7.10e-01 | 100.0% | 100.0% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 66.0 | 6.86e-01 | 100.0% | 94.7% |
| 5jzgA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 62.0 | 5.91e-01 | 100.0% | 73.0% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 61.0 | 5.32e-01 | 100.0% | 57.0% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 70.0 | 7.22e-01 | 100.0% | 100.0% |
| 1bev100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 64.0 | 5.75e-01 | 100.0% | 66.4% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 59.0 | 6.38e-01 | 99.0% | 96.4% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 65.0 | 5.86e-01 | 100.0% | 68.6% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 62.0 | 6.57e-01 | 100.0% | 97.8% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 63.0 | 6.19e-01 | 100.0% | 83.5% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 63.0 | 6.54e-01 | 100.0% | 96.7% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 63.0 | 6.13e-01 | 100.0% | 81.4% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 37.0 | 4.97e-01 | 90.5% | 91.3% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 62.0 | 6.16e-01 | 100.0% | 85.1% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 61.0 | 6.35e-01 | 100.0% | 94.6% |
| 5c8cB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.83e-01 | 100.0% | 67.5% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 55.0 | 5.99e-01 | 99.0% | 95.8% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 53.0 | 5.45e-01 | 100.0% | 80.4% |
| 1b35A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 68.0 | 6.14e-01 | 100.0% | 78.5% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 68.0 | 6.19e-01 | 100.0% | 80.4% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 61.0 | 6.00e-01 | 100.0% | 83.9% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 52.0 | 5.48e-01 | 100.0% | 83.1% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 63.0 | 5.64e-01 | 100.0% | 69.2% |
| 2ws9100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 5.92e-01 | 100.0% | 78.0% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 63.0 | 6.11e-01 | 100.0% | 86.6% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 66.0 | 5.88e-01 | 100.0% | 79.6% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.70 | 47.0 | 5.40e-01 | 99.5% | 91.9% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 6.27e-01 | 98.5% | 95.1% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 64.0 | 6.22e-01 | 100.0% | 88.7% |
| 3cjiA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 63.0 | 5.74e-01 | 100.0% | 84.1% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 39.0 | 4.89e-01 | 98.0% | 98.4% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 45.0 | 5.05e-01 | 98.0% | 94.7% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.63 | 43.0 | 5.06e-01 | 99.0% | 100.0% |
| 6mnjA01 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 45.0 | 5.04e-01 | 94.5% | 96.1% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 56.0 | 4.79e-01 | 100.0% | 79.0% |
| 3emrA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.58 | 39.0 | 3.53e-01 | 99.5% | 48.9% |
| 4xuoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 43.0 | 4.84e-01 | 98.0% | 98.7% |
| 4zchA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 37.0 | 4.51e-01 | 95.5% | 100.0% |
| 1oh4A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 46.0 | 4.90e-01 | 98.0% | 96.6% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 38.0 | 4.52e-01 | 98.5% | 100.0% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 40.0 | 4.67e-01 | 95.5% | 100.0% |
| 2c9aA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 4.66e-01 | 96.0% | 98.1% |
| 4gwmA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 43.0 | 4.69e-01 | 96.5% | 98.2% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 41.0 | 4.58e-01 | 97.0% | 98.7% |
| 3hwjA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.54 | 39.0 | 4.47e-01 | 94.5% | 100.0% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 36.0 | 4.28e-01 | 98.5% | 100.0% |
| 5l73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 42.0 | 4.53e-01 | 95.0% | 93.7% |
| 2c9kA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 42.0 | 4.57e-01 | 97.0% | 98.2% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.54 | 33.0 | 4.11e-01 | 96.0% | 100.0% |
| 2r7eB03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 40.0 | 4.46e-01 | 99.0% | 100.0% |
| 4bz4A00 | 2.60.120.1220 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 4.64e-01 | 93.0% | 95.0% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.91 | 76.0 | 7.27e-01 | 100.0% | 77.1% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.89 | 80.0 | 7.38e-01 | 100.0% | 75.6% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.89 | 80.0 | 7.29e-01 | 100.0% | 73.6% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.89 | 86.0 | 7.54e-01 | 100.0% | 74.6% |
| 1696117 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.88 | 69.0 | 7.27e-01 | 100.0% | 87.5% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.88 | 79.0 | 7.51e-01 | 100.0% | 80.8% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.88 | 79.0 | 7.16e-01 | 100.0% | 72.9% |
| 4888111 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.87 | 68.0 | 7.04e-01 | 100.0% | 85.2% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.87 | 69.0 | 6.71e-01 | 100.0% | 75.6% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.87 | 68.0 | 6.81e-01 | 100.0% | 79.7% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.86 | 81.0 | 7.24e-01 | 100.0% | 73.9% |
| 2793614 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.86 | 69.0 | 6.74e-01 | 100.0% | 76.6% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.86 | 81.0 | 7.04e-01 | 100.0% | 68.8% |
| 139106 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.86 | 74.0 | 7.05e-01 | 100.0% | 78.3% |
| 1693517 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.86 | 68.0 | 6.91e-01 | 100.0% | 82.0% |
| 4882965 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.86 | 56.0 | 6.49e-01 | 97.5% | 89.1% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.86 | 58.0 | 6.07e-01 | 87.1% | 74.5% |
| 2505858 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.86 | 66.0 | 6.69e-01 | 98.5% | 80.2% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.85 | 74.0 | 6.99e-01 | 100.0% | 77.4% |
| 1949032 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.85 | 70.0 | 6.60e-01 | 100.0% | 72.7% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.85 | 71.0 | 6.58e-01 | 100.0% | 71.0% |
| 1694889 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.85 | 62.0 | 6.14e-01 | 100.0% | 70.3% |
| 2726763 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.85 | 82.0 | 7.19e-01 | 100.0% | 75.0% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.85 | 70.0 | 6.42e-01 | 100.0% | 68.4% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.85 | 69.0 | 6.79e-01 | 100.0% | 79.9% |
| 2099184 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.85 | 82.0 | 6.98e-01 | 100.0% | 72.3% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.85 | 71.0 | 6.64e-01 | 100.0% | 72.2% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.84 | 75.0 | 6.99e-01 | 100.0% | 76.9% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 71.0 | 6.81e-01 | 100.0% | 77.9% |
| 2389609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 73.0 | 6.79e-01 | 100.0% | 74.9% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 75.0 | 6.92e-01 | 100.0% | 74.9% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 74.0 | 6.97e-01 | 100.0% | 77.2% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.84 | 68.0 | 6.11e-01 | 100.0% | 63.5% |
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.83 | 78.0 | 7.00e-01 | 100.0% | 74.2% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.83 | 75.0 | 7.00e-01 | 100.0% | 78.2% |
| 1211 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.83 | 68.0 | 6.22e-01 | 100.0% | 67.1% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.83 | 73.0 | 6.72e-01 | 100.0% | 74.0% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.82 | 68.0 | 7.09e-01 | 100.0% | 92.0% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.82 | 78.0 | 6.86e-01 | 100.0% | 71.8% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.82 | 65.0 | 6.75e-01 | 100.0% | 88.1% |
| 1693524 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.81 | 62.0 | 6.50e-01 | 100.0% | 86.2% |
| 1405131 | 10.2.1.51 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP | 0.81 | 69.0 | 6.19e-01 | 100.0% | 66.9% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.81 | 78.0 | 6.87e-01 | 100.0% | 73.7% |
| 1841617 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 72.0 | 6.61e-01 | 100.0% | 74.2% |
| 143448 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.80 | 62.0 | 6.84e-01 | 96.5% | 97.0% |
| 1264422 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 66.0 | 6.42e-01 | 100.0% | 78.5% |
| 2330242 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.80 | 63.0 | 6.59e-01 | 98.0% | 89.1% |
| 1724852 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.79 | 61.0 | 6.71e-01 | 100.0% | 96.4% |
| 143449 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.79 | 63.0 | 6.74e-01 | 100.0% | 94.9% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.78 | 66.0 | 6.80e-01 | 100.0% | 92.2% |
| 2982736 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 64.0 | 6.06e-01 | 100.0% | 72.6% |
| 1214 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.78 | 62.0 | 6.65e-01 | 98.0% | 94.3% |
| 2579093 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.77 | 63.0 | 6.05e-01 | 100.0% | 74.5% |
| 1215 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.77 | 61.0 | 6.52e-01 | 100.0% | 95.3% |
| 2721878 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 69.0 | 6.37e-01 | 100.0% | 75.6% |
| 2389608 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.76 | 70.0 | 6.51e-01 | 100.0% | 79.0% |
| 1841618 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.76 | 73.0 | 6.64e-01 | 100.0% | 79.4% |
| 3606028 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.75 | 43.0 | 5.58e-01 | 94.5% | 96.6% |
| 140026 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.75 | 65.0 | 5.86e-01 | 100.0% | 68.6% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.75 | 66.0 | 6.08e-01 | 100.0% | 73.5% |
| 2542980 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.75 | 59.0 | 6.07e-01 | 99.5% | 85.9% |
| 1233 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.74 | 63.0 | 6.49e-01 | 100.0% | 93.7% |
| 1204 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.74 | 64.0 | 5.63e-01 | 100.0% | 63.9% |
| 2579092 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.74 | 70.0 | 6.31e-01 | 100.0% | 79.8% |
| 2100469 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.74 | 68.0 | 6.21e-01 | 100.0% | 75.8% |
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.73 | 62.0 | 6.50e-01 | 100.0% | 96.7% |
| 2884840 | 10.2.1.50 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.73 | 64.0 | 5.52e-01 | 100.0% | 62.5% |
| 148379 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.73 | 64.0 | 5.52e-01 | 100.0% | 62.0% |
| 2006903 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.73 | 63.0 | 5.59e-01 | 100.0% | 65.0% |
| 2526957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.73 | 64.0 | 5.66e-01 | 100.0% | 65.6% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.72 | 68.0 | 6.11e-01 | 100.0% | 81.0% |
| 1232 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.72 | 63.0 | 6.45e-01 | 100.0% | 95.4% |
| 3607284 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 43.0 | 5.26e-01 | 97.0% | 93.8% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.70 | 62.0 | 6.10e-01 | 100.0% | 86.6% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 67.0 | 5.97e-01 | 100.0% | 79.3% |
| 3075118 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.70 | 66.0 | 5.98e-01 | 100.0% | 79.0% |
| 2117349 | 10.2.1.10 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat | 0.69 | 50.0 | 5.20e-01 | 100.0% | 78.0% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.69 | 64.0 | 6.19e-01 | 100.0% | 88.0% |
| None | — | 0.67 | 63.0 | 6.13e-01 | 100.0% | 95.9% | |
| 4937645 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.67 | 28.0 | 4.32e-01 | 90.0% | 96.2% |
| 169770 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.67 | 63.0 | 5.74e-01 | 100.0% | 84.1% |
| 2583136 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.67 | 40.0 | 4.25e-01 | 99.0% | 66.5% |
| 1621265 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.65 | 40.0 | 3.21e-01 | 97.0% | 32.8% |
| 3885530 | 10.32.1.183 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM87A-B_GOLD | 0.62 | 46.0 | 5.20e-01 | 94.0% | 98.7% |
| 3501851 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 34.0 | 4.23e-01 | 97.5% | 86.7% |
| 3805836 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 38.0 | 4.49e-01 | 91.5% | 90.4% |
| 3282993 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.61 | 41.0 | 4.69e-01 | 98.0% | 92.0% |
| 3919667 | 269.1.1.3 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › COLFI | 0.55 | 43.0 | 4.26e-01 | 98.5% | 78.4% |
| 3593524 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 47.0 | 4.68e-01 | 98.0% | 99.0% |
| 5083402 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 43.0 | 4.47e-01 | 99.0% | 98.9% |
D4
medium
residues 593-614_642-833
Domain cluster:
rep: hypothetical_protein_2__YP_009337767__Sanxia_picorna-like_virus_3__1923372__D664-871
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08762.17 best | CRPV_capsid | 48.4 | 1.30e-12 | 89.7% | 91.5% |