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hypothetical_protein_2
Euk-VirHubei_tombus-like_virus_8
hypothetical_protein_2__YP_009336790__Hubei_tombus-like_virus_8__1923295
Identity
- Accession:
- YP_009336790 ↗
- Protein ID:
- hypothetical_protein_2
- Kingdom:
- euk
Quality
86.4
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 323-478
Domain cluster:
rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 93.2 | 2.20e-26 | 84.6% | 27.8% |
D2
medium
residues 30-52_126-144_244-263
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p01A01 | 6.10.140.590 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 37.0 | 3.34e-01 | 88.7% | 44.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928310 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.56 | 43.0 | 3.79e-01 | 83.9% | 94.6% |
| 4999454 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.51 | 35.0 | 2.97e-01 | 93.5% | 42.3% |
D3
medium
residues 53-125_204-243
Domain cluster:
rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 53.4 | 2.70e-14 | 72.6% | 16.7% |
| PF00998.29 | RdRP_3 | 36.9 | 2.70e-09 | 35.4% | 7.2% |
D4
medium
residues 145-203_264-322
Domain cluster:
rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 75.1 | 6.90e-21 | 53.4% | 12.1% |
| PF00998.29 | RdRP_3 | 60.0 | 2.60e-16 | 51.7% | 11.9% |