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hypothetical_protein_2

Euk-Vir

Wenzhou_channeled_applesnail_virus_1

hypothetical_protein_2__YP_009336805__Wenzhou_channeled_applesnail_virus_1__1923557

Identity

Accession:
YP_009336805 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

70.1 mean pLDDT

Taxonomy

Wenzhou_channeled_applesnail_virus_1

TaxID: 1923557

Cluster

View cluster (173 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 84-263
PDB
Domain cluster: rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
D2 medium residues 389-416_467-502_525-559
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337401__Wenzhou_picorna-like_virus_4__1923626__D416-432_473-501_534-569
D3 medium residues 614-651_712-728_750-767_792-826
PDB
D4 medium residues 687-711_768-791_827-849
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.90 85.0 5.48e-01 100.0% 57.6%
7chkB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.85 70.0 5.66e-01 88.9% 72.7%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 77.0 5.31e-01 100.0% 59.3%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.84 78.0 5.36e-01 100.0% 58.5%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.83 76.0 5.14e-01 100.0% 56.1%
3vbhC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 75.0 5.09e-01 100.0% 54.5%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 75.0 5.12e-01 100.0% 55.3%
3napA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 75.0 4.97e-01 100.0% 49.6%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 74.0 5.06e-01 100.0% 55.5%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 73.0 4.89e-01 100.0% 56.1%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.81 74.0 5.00e-01 100.0% 54.3%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 72.0 5.01e-01 100.0% 56.5%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 73.0 4.96e-01 100.0% 51.9%
2y26A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 69.0 5.27e-01 100.0% 71.6%
3up6A02 2.60.40.3380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 51.0 4.01e-01 94.4% 84.6%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 50.0 3.92e-01 93.1% 77.5%
1flkA00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.60 47.0 3.50e-01 87.5% 58.5%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 4.14e-01 87.5% 81.2%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 41.0 3.84e-01 81.9% 59.3%
2xskA00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 4.33e-01 88.9% 91.6%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 4.24e-01 87.5% 84.2%
3zjbA00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.58 45.0 3.46e-01 86.1% 69.2%
1h2cA00 2.70.20.20 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain 0.58 42.0 3.51e-01 76.4% 96.8%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.07e-01 86.1% 69.2%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 46.0 3.57e-01 90.3% 74.4%
1pqzA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.56 42.0 3.38e-01 79.2% 69.3%
2dbjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 3.80e-01 84.7% 76.1%
1kv3A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.80e-01 88.9% 85.5%
1w99A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 42.0 3.24e-01 87.5% 84.8%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 42.0 3.37e-01 84.7% 87.7%
2x41A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 41.0 3.55e-01 81.9% 83.2%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.78e-01 88.9% 86.8%
2zaiA04 2.60.40.3030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.57e-01 87.5% 81.1%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 48.0 4.05e-01 98.6% 96.6%
4cu7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.67e-01 88.9% 88.4%
7bi2A02 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 44.0 3.73e-01 95.8% 100.0%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 3.42e-01 90.3% 84.9%
2oo3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 2.61e-01 76.4% 23.6%
2erjB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.67e-01 87.5% 58.7%
3fruA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.53 41.0 3.07e-01 83.3% 57.6%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 42.0 3.41e-01 87.5% 90.7%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.53 36.0 4.09e-01 75.0% 96.2%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.52 44.0 3.50e-01 98.6% 91.9%
4nzdB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 42.0 3.67e-01 87.5% 64.2%
4kkpA02 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.51e-01 84.7% 87.6%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 3.38e-01 90.3% 76.6%
2enqA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 38.0 3.06e-01 81.9% 98.1%
5u8rA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.58e-01 86.1% 82.4%
1uenA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.46e-01 87.5% 69.6%
3gtyX02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.51 41.0 3.97e-01 91.7% 89.3%
2dpkA01 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.51 42.0 3.60e-01 93.1% 85.0%
5chtB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 41.0 2.72e-01 90.3% 47.0%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 36.0 3.68e-01 77.8% 93.0%
3l5iA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.72e-01 86.1% 85.2%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2440134 10.2.1.44 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.81 74.0 5.35e-01 100.0% 63.3%
31099 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.80 72.0 5.01e-01 100.0% 56.5%
3939070 11.1.1.1173 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 0.61 50.0 4.20e-01 90.3% 76.8%
4427418 11.1.1.1229 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27268 0.61 45.0 4.10e-01 77.8% 85.3%
3473069 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 46.0 3.83e-01 86.1% 68.1%
3482256 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 47.0 3.95e-01 86.1% 85.0%
3241005 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.58 50.0 4.07e-01 95.8% 78.5%
3486745 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 3.73e-01 86.1% 81.5%
4078175 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 4.08e-01 83.3% 90.5%
5034757 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.21e-01 90.3% 88.0%
3931538 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 3.94e-01 86.1% 81.0%
3382614 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 45.0 2.74e-01 88.9% 22.0%
4926801 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 3.74e-01 88.9% 80.0%
5033281 304.100.1.1 ↗ a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.57 42.0 4.40e-01 79.2% 100.0%
3625109 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.57 44.0 3.30e-01 87.5% 69.0%
3863278 11.1.1.239 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 0.56 45.0 3.81e-01 88.9% 88.8%
3179842 11.1.1.644 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Pom152 0.56 46.0 3.92e-01 91.7% 75.8%
4236553 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.56 45.0 3.53e-01 91.7% 79.4%
3637741 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 3.42e-01 91.7% 73.0%
3451106 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.55 44.0 3.61e-01 87.5% 60.7%
3571964 382.1.1.2 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP 0.55 38.0 3.46e-01 76.4% 54.8%
3505613 11.1.1.236 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.55 44.0 4.03e-01 90.3% 86.0%
3573566 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 3.61e-01 88.9% 65.9%
3846579 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.54 43.0 3.33e-01 87.5% 94.7%
3226049 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.54 46.0 3.74e-01 97.2% 81.4%
5063417 11.1.1.236 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.54 41.0 3.86e-01 87.5% 65.3%
3486123 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.54 42.0 3.75e-01 86.1% 77.1%
5076544 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 41.0 3.78e-01 84.7% 69.5%
3892842 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.54 38.0 4.04e-01 76.4% 86.2%
4061212 11.1.1.236 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.53 41.0 3.62e-01 87.5% 84.3%
1569515 11.1.1.248 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 0.53 40.0 3.77e-01 83.3% 84.6%
3969420 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.20e-01 91.7% 74.0%
3929545 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.47e-01 88.9% 87.9%
3390438 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 3.47e-01 84.7% 80.8%
4933925 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 3.53e-01 88.9% 80.0%
3219643 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.52 41.0 3.61e-01 88.9% 76.5%
3515326 10.10.1.0 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.52 41.0 3.44e-01 88.9% 54.1%
3958368 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 40.0 3.75e-01 83.3% 86.7%
3791696 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 42.0 3.31e-01 88.9% 50.3%
4505312 230.2.1.2 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 0.52 41.0 3.78e-01 86.1% 95.8%
4384109 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.52 41.0 3.83e-01 87.5% 69.3%
3400084 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.52 45.0 3.48e-01 97.2% 98.1%
1521 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 41.0 3.46e-01 87.5% 69.6%
3408727 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 45.0 3.48e-01 98.6% 98.2%
3578165 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.51 45.0 3.52e-01 100.0% 99.4%
393055 11.1.1.229 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IRK_C 0.51 43.0 3.43e-01 100.0% 91.4%
3576642 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.50 42.0 3.34e-01 100.0% 95.9%
3490255 11.1.4.114 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7062 0.50 38.0 3.45e-01 86.1% 60.0%