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hypothetical_protein_2
Euk-VirSanxia_sobemo-like_virus_2
hypothetical_protein_2__YP_009336891__Sanxia_sobemo-like_virus_2__1923381
Identity
- Accession:
- YP_009336891 ↗
- Protein ID:
- hypothetical_protein_2
- Kingdom:
- euk
Quality
91.3
mean pLDDT
Cluster
View cluster (85 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 94-182_205-279
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qbuA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.75 | 33.0 | 4.96e-01 | 70.7% | 100.0% |
| 3h5xA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.74 | 52.0 | 6.12e-01 | 88.4% | 100.0% |
| 1gx5A03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.73 | 53.0 | 6.16e-01 | 89.0% | 100.0% |
| 4mz0B05 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.72 | 31.0 | 4.66e-01 | 72.0% | 97.0% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 33.0 | 4.83e-01 | 70.7% | 100.0% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.72 | 33.0 | 4.74e-01 | 74.4% | 95.9% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.71 | 33.0 | 4.87e-01 | 73.8% | 100.0% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.70 | 34.0 | 4.84e-01 | 77.4% | 100.0% |
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 35.0 | 4.90e-01 | 73.2% | 100.0% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.70 | 37.0 | 5.02e-01 | 76.8% | 100.0% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.70 | 34.0 | 4.89e-01 | 75.0% | 100.0% |
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 33.0 | 4.76e-01 | 74.4% | 100.0% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.70 | 29.0 | 4.36e-01 | 73.2% | 92.5% |
| 7uinD01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.69 | 62.0 | 6.24e-01 | 97.6% | 94.6% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.69 | 29.0 | 4.32e-01 | 75.0% | 91.3% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.68 | 29.0 | 4.29e-01 | 72.0% | 91.4% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 31.0 | 4.48e-01 | 70.7% | 100.0% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.68 | 32.0 | 4.59e-01 | 78.7% | 97.4% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 32.0 | 4.55e-01 | 70.7% | 97.4% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.67 | 31.0 | 4.27e-01 | 72.0% | 88.5% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.66 | 33.0 | 4.30e-01 | 78.7% | 84.6% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.65 | 29.0 | 4.10e-01 | 72.0% | 88.2% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 35.0 | 4.56e-01 | 73.2% | 95.5% |
| 1d1rA00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.64 | 28.0 | 3.78e-01 | 70.7% | 77.1% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 32.0 | 4.44e-01 | 73.2% | 98.8% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 36.0 | 4.63e-01 | 78.0% | 98.9% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 32.0 | 4.40e-01 | 76.8% | 97.6% |
| 3n28A02 | 3.30.70.2020 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.46e-01 | 97.0% | 88.7% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 36.0 | 4.63e-01 | 80.5% | 98.9% |
| 1vjqA00 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.62 | 29.0 | 4.22e-01 | 76.2% | 100.0% |
| 2qz8A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.60 | 31.0 | 4.27e-01 | 73.2% | 100.0% |
| 4qu7A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 30.0 | 4.08e-01 | 71.3% | 95.1% |
| 2r7rA04 | 3.30.70.2480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 46.0 | 4.69e-01 | 92.1% | 82.8% |
| 2rilA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 34.0 | 4.30e-01 | 76.8% | 95.8% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 33.0 | 4.22e-01 | 76.2% | 100.0% |
| 2kviA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 29.0 | 3.93e-01 | 72.6% | 97.4% |
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.57 | 32.0 | 3.96e-01 | 73.8% | 89.9% |
| 1s5jA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.57 | 49.0 | 5.02e-01 | 95.1% | 96.8% |
| 3oq2A00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 34.0 | 4.19e-01 | 77.4% | 98.0% |
| 2v8pA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.56 | 33.0 | 3.80e-01 | 95.1% | 80.9% |
| 3pyfA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.55 | 37.0 | 4.01e-01 | 95.7% | 80.3% |
| 6fijA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.55 | 38.0 | 3.10e-01 | 70.1% | 90.3% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 29.0 | 3.95e-01 | 70.7% | 100.0% |
| 1kkhA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.55 | 34.0 | 3.81e-01 | 92.1% | 77.9% |
| 1x31C02 | 3.30.70.1520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Heterotetrameric sarcosine oxidase | 0.54 | 28.0 | 3.82e-01 | 72.0% | 100.0% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 31.0 | 3.89e-01 | 72.6% | 95.7% |
| 2pgcC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 32.0 | 3.97e-01 | 73.8% | 100.0% |
| 3k17A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 36.0 | 3.93e-01 | 92.7% | 82.1% |
| 1mwqA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.53 | 32.0 | 4.01e-01 | 77.4% | 100.0% |
| 4hacA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 34.0 | 3.83e-01 | 92.1% | 83.7% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.52 | 36.0 | 3.93e-01 | 93.9% | 85.1% |
| 5uejA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 34.0 | 4.05e-01 | 72.6% | 97.4% |
| 4wp3C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 42.0 | 4.06e-01 | 88.4% | 90.4% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 217141 | 304.48.1.15 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3 | 0.84 | 80.0 | 6.00e-01 | 100.0% | 55.2% |
| 3483524 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.77 | 71.0 | 5.73e-01 | 100.0% | 61.6% |
| 4882532 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.75 | 70.0 | 5.50e-01 | 100.0% | 62.6% |
| 3479114 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.75 | 70.0 | 4.62e-01 | 100.0% | 71.4% |
| 4477962 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 33.0 | 4.88e-01 | 70.7% | 100.0% |
| 4357399 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.72 | 33.0 | 4.85e-01 | 73.2% | 100.0% |
| 4491533 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.72 | 31.0 | 4.72e-01 | 71.3% | 100.0% |
| 4033416 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.72 | 33.0 | 4.82e-01 | 73.8% | 100.0% |
| 4646361 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.72 | 32.0 | 4.80e-01 | 72.6% | 98.6% |
| 4480479 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.72 | 32.0 | 4.85e-01 | 72.6% | 100.0% |
| 4362064 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.72 | 32.0 | 4.74e-01 | 72.6% | 98.6% |
| 3581763 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.71 | 32.0 | 4.69e-01 | 70.7% | 97.1% |
| 4567408 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.71 | 32.0 | 4.63e-01 | 72.0% | 95.7% |
| 4128792 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.71 | 35.0 | 4.80e-01 | 72.0% | 95.0% |
| 4658950 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.71 | 33.0 | 4.69e-01 | 73.8% | 94.7% |
| 4316392 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.71 | 32.0 | 4.71e-01 | 72.0% | 98.6% |
| 4101997 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.71 | 32.0 | 4.77e-01 | 76.2% | 100.0% |
| 4023193 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.71 | 30.0 | 4.53e-01 | 70.1% | 96.9% |
| 3587825 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 33.0 | 4.85e-01 | 70.1% | 100.0% |
| 3949749 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.70 | 30.0 | 4.61e-01 | 70.7% | 100.0% |
| 4293970 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.70 | 34.0 | 4.75e-01 | 77.4% | 98.7% |
| 4070496 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.70 | 34.0 | 4.76e-01 | 78.0% | 98.7% |
| 138899 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 34.0 | 4.64e-01 | 77.4% | 93.8% |
| 5039109 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.69 | 34.0 | 4.77e-01 | 71.3% | 100.0% |
| 3287011 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.69 | 31.0 | 4.59e-01 | 72.0% | 98.6% |
| 4277197 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.69 | 31.0 | 4.52e-01 | 72.6% | 97.1% |
| 4322599 | 304.7.1.26 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › YqfD | 0.69 | 30.0 | 4.24e-01 | 71.3% | 86.7% |
| 4299576 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.69 | 31.0 | 4.25e-01 | 72.0% | 83.1% |
| 4946034 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.68 | 32.0 | 4.43e-01 | 72.6% | 90.0% |
| 4220908 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.68 | 31.0 | 4.58e-01 | 72.6% | 100.0% |
| 3068775 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.68 | 63.0 | 5.83e-01 | 100.0% | 84.7% |
| 4478614 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 33.0 | 4.42e-01 | 70.7% | 86.4% |
| 3916504 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.68 | 57.0 | 4.88e-01 | 92.7% | 57.3% |
| 3742864 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 35.0 | 4.20e-01 | 77.4% | 74.5% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.67 | 31.0 | 4.42e-01 | 70.7% | 98.6% |
| 5011764 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 31.0 | 4.44e-01 | 78.0% | 92.5% |
| 5067296 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 32.0 | 4.46e-01 | 72.6% | 93.8% |
| 3603319 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.66 | 29.0 | 4.07e-01 | 70.7% | 83.7% |
| 3674181 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.66 | 30.0 | 3.79e-01 | 72.6% | 69.0% |
| 3931851 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.65 | 56.0 | 4.69e-01 | 100.0% | 55.5% |
| 4235667 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.65 | 34.0 | 4.74e-01 | 76.2% | 100.0% |
| 4998565 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.64 | 29.0 | 4.09e-01 | 71.3% | 90.7% |
| 3688260 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.62 | 34.0 | 4.09e-01 | 71.3% | 81.0% |
| 5037946 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.62 | 29.0 | 3.99e-01 | 72.0% | 91.0% |
| 5001989 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.61 | 37.0 | 4.29e-01 | 94.5% | 84.3% |
| 3962170 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.61 | 40.0 | 4.79e-01 | 76.8% | 99.1% |
| 4598614 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.60 | 36.0 | 4.15e-01 | 75.6% | 80.0% |
| 4987642 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.60 | 34.0 | 3.95e-01 | 75.6% | 76.7% |
| 5039606 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.59 | 35.0 | 4.04e-01 | 94.5% | 80.5% |
| 4946980 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.55 | 38.0 | 4.07e-01 | 100.0% | 81.4% |
| 5219 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.55 | 36.0 | 3.92e-01 | 100.0% | 78.1% |
| 5054879 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.54 | 37.0 | 3.97e-01 | 98.8% | 79.3% |
| 4978605 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 49.0 | 4.11e-01 | 100.0% | 77.5% |
| 4994851 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.53 | 36.0 | 3.80e-01 | 98.2% | 77.9% |
| 4934080 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 36.0 | 3.74e-01 | 76.8% | 75.3% |
| 3381141 | 304.48.1.24 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 | 0.52 | 47.0 | 4.69e-01 | 100.0% | 97.1% |
| 4929225 | 304.8.1.10 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 | 0.51 | 35.0 | 3.68e-01 | 76.2% | 76.0% |
| 4351981 | 304.1.1.4 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › M3K_C | 0.51 | 35.0 | 3.75e-01 | 99.4% | 79.3% |
| 5031817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 35.0 | 3.71e-01 | 75.6% | 78.6% |
| 1681577 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.50 | 42.0 | 4.15e-01 | 87.8% | 90.1% |
| 4975616 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 30.0 | 3.34e-01 | 73.8% | 72.6% |
D2
high
residues 283-353
Domain cluster:
rep: hypothetical_protein_2__YP_009330046__Hubei_sobemo-like_virus_16__1923201__D209-277
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cqcB01 | 1.20.58.1380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 51.0 | 4.75e-01 | 77.5% | 70.0% |
| 3hiuD00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 50.0 | 3.90e-01 | 76.1% | 50.7% |
| 5cl3A00 | 1.25.10.90 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.69 | 54.0 | 3.81e-01 | 85.9% | 27.7% |
| 2gs4A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 50.0 | 3.86e-01 | 77.5% | 89.2% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.66 | 48.0 | 4.16e-01 | 77.5% | 68.4% |
| 4y6cA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 54.0 | 3.88e-01 | 90.1% | 38.2% |
| 3zheD01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 54.0 | 3.99e-01 | 94.4% | 53.7% |
| 2chpA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 47.0 | 3.74e-01 | 77.5% | 93.2% |
| 3l9tA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.64 | 52.0 | 4.47e-01 | 91.5% | 61.0% |
| 3bjdA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.64 | 46.0 | 4.41e-01 | 78.9% | 90.9% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.63 | 43.0 | 4.01e-01 | 70.4% | 73.9% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.63 | 52.0 | 4.64e-01 | 90.1% | 68.4% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.62 | 47.0 | 4.18e-01 | 84.5% | 90.0% |
| 2xgsB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 46.0 | 4.63e-01 | 83.1% | 79.5% |
| 1hh8A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 51.0 | 3.81e-01 | 94.4% | 46.9% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 52.0 | 4.22e-01 | 97.2% | 77.5% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.59 | 43.0 | 3.53e-01 | 77.5% | 60.2% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 50.0 | 3.52e-01 | 94.4% | 48.7% |
| 2vyiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 47.0 | 3.98e-01 | 91.5% | 73.4% |
| 4gywA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 45.0 | 4.04e-01 | 87.3% | 61.0% |
| 1w3bB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 48.0 | 3.13e-01 | 98.6% | 36.1% |
| 2fo7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 46.0 | 3.76e-01 | 90.1% | 49.3% |
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 47.0 | 3.43e-01 | 95.8% | 51.9% |
| 3jsbA01 | 1.20.1440.300 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain | 0.55 | 40.0 | 3.86e-01 | 77.5% | 71.6% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3643952 | 109.4.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N | 0.74 | 59.0 | 4.59e-01 | 87.3% | 49.0% |
| 3740106 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.73 | 53.0 | 4.49e-01 | 76.1% | 76.5% |
| 3961 | 150.1.1.7 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF892 | 0.73 | 52.0 | 4.01e-01 | 76.1% | 87.5% |
| 3944931 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.73 | 50.0 | 4.62e-01 | 71.8% | 97.8% |
| 3467137 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.71 | 59.0 | 3.52e-01 | 90.1% | 13.3% |
| 3227178 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 56.0 | 4.23e-01 | 90.1% | 44.6% |
| 3929749 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 55.0 | 4.20e-01 | 90.1% | 41.1% |
| 3686313 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 57.0 | 3.85e-01 | 93.0% | 36.2% |
| 3965857 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.66 | 52.0 | 4.85e-01 | 88.7% | 69.1% |
| 3784566 | 604.1.1.191 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF29057 | 0.62 | 49.0 | 4.49e-01 | 90.1% | 100.0% |
| 3364221 | 109.7.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › E_motif | 0.62 | 46.0 | 4.35e-01 | 81.7% | 70.0% |
| 3422231 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.62 | 47.0 | 4.31e-01 | 81.7% | 62.1% |
| 4343342 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 50.0 | 4.07e-01 | 94.4% | 51.7% |
| 3838434 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 47.0 | 3.75e-01 | 84.5% | 72.4% |
| 4974234 | 604.12.1.141 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › 8xMP | 0.60 | 43.0 | 4.11e-01 | 77.5% | 90.6% |
| 1840703 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.60 | 46.0 | 4.23e-01 | 84.5% | 64.9% |
| 3320156 | 109.59.1.13 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › E_motif | 0.59 | 44.0 | 4.37e-01 | 81.7% | 84.0% |
| 4213018 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.59 | 48.0 | 3.52e-01 | 91.5% | 39.5% |
| 4974476 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.58 | 49.0 | 2.91e-01 | 100.0% | 18.0% |
| 3225250 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.58 | 40.0 | 3.96e-01 | 73.2% | 78.7% |
| 3800596 | 109.4.1.1474 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_16 | 0.56 | 47.0 | 3.58e-01 | 97.2% | 50.5% |
| 3214449 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.55 | 38.0 | 3.69e-01 | 73.2% | 80.0% |
| 4291115 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.50 | 41.0 | 3.95e-01 | 88.7% | 80.0% |
D3
medium
residues 1-93_183-204
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5367 | 304.48.1.8 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1 | 0.77 | 72.0 | 4.87e-01 | 100.0% | 53.4% |
| 1875037 | 304.48.1.8 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1 | 0.77 | 72.0 | 4.84e-01 | 100.0% | 49.9% |
| 2541763 | 304.48.1.8 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1 | 0.76 | 71.0 | 4.82e-01 | 100.0% | 53.9% |
| None | — | 0.74 | 70.0 | 4.75e-01 | 100.0% | 51.6% | |
| 1173784 | 304.48.1.8 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_1 | 0.74 | 70.0 | 4.73e-01 | 100.0% | 51.5% |
| 1279063 | 304.48.1.13 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flavi_NS5 | 0.72 | 65.0 | 4.36e-01 | 100.0% | 47.4% |
| 5366 | 304.48.1.15 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3 | 0.69 | 64.0 | 4.31e-01 | 100.0% | 49.7% |
| 217141 | 304.48.1.15 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3 | 0.69 | 63.0 | 4.40e-01 | 100.0% | 53.5% |
| 3691350 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.67 | 61.0 | 4.62e-01 | 100.0% | 75.6% |
| 3918122 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.67 | 61.0 | 4.17e-01 | 100.0% | 50.6% |
| 4361688 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.67 | 61.0 | 4.22e-01 | 100.0% | 51.7% |
| 3473558 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.64 | 52.0 | 4.13e-01 | 87.0% | 79.1% |
| 3250871 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.61 | 46.0 | 4.22e-01 | 80.9% | 60.7% |
| 5078830 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.57 | 52.0 | 3.94e-01 | 100.0% | 75.1% |