hypothetical_protein_2

Euk-Vir

Changjiang_tombus-like_virus_10

hypothetical_protein_2__YP_009337075__Changjiang_tombus-like_virus_10__1922803

Identity

89.9 mean pLDDT

Changjiang_tombus-like_virus_10

TaxID: 1922803

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 334-472

PDB

Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	81.7	6.70e-23	92.8%	27.6%

D2 medium residues 23-78_106-139_199-211_235-267

PDB

Domain cluster: rep: RNA-dependent_RNA_polymerase_3D__NP_740737__Parechovirus_A__1803956__D11-60_159-185_260-299

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	28.1	1.20e-06	43.4%	12.1%
PF00998.29	RdRP_3	41.1	1.40e-10	34.6%	8.2%
PF00998.29	RdRP_3	37.2	2.20e-09	27.9%	7.4%

D3 medium residues 79-105_212-234

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4a0zA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	37.0	3.54e-01	78.0%	91.5%
2k9qA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.50	31.0	3.32e-01	88.0%	72.5%

D4 medium residues 140-198_268-333

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	74.0	1.40e-20	52.8%	13.4%
PF00998.29	RdRP_3	78.8	5.30e-22	50.4%	12.6%