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hypothetical_protein_2

Euk-Vir

Changjiang_sobemo-like_virus_1

hypothetical_protein_2__YP_009337083__Changjiang_sobemo-like_virus_1__1922800

Identity

Accession:
YP_009337083 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

88.4 mean pLDDT

Taxonomy

Changjiang_sobemo-like_virus_1

TaxID: 1922800

Cluster

View cluster (25 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 300-348
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hs7A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 56.0 4.62e-01 98.0% 83.5%
1ze0A01 1.20.120.700 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nitrate reductase, subunit delta (NarJ) 0.60 48.0 4.20e-01 98.0% 57.1%
2dsjA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.58 45.0 4.30e-01 98.0% 76.1%
2j16A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 45.0 3.44e-01 98.0% 100.0%
2djoA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 42.0 3.63e-01 91.8% 49.4%
1nklA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.51 38.0 3.51e-01 91.8% 80.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5022218 195.1.1.1 ↗ alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.68 53.0 4.19e-01 91.8% 47.0%
3956659 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.63 51.0 3.57e-01 95.9% 30.0%
3700138 574.1.1.1 ↗ alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp 0.61 48.0 4.34e-01 89.8% 78.6%
3950150 564.1.1.0 ↗ alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors 0.55 43.0 3.99e-01 95.9% 71.4%
2075294 3712.1.1.1 ↗ a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 0.54 37.0 3.14e-01 77.6% 72.7%
3271713 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.89e-01 98.0% 71.4%
D2 medium residues 1-110
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337735__Wenling_sobemo-like_virus_2__1923541__D4-91_185-200
D3 medium residues 111-161_214-299
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02123.22 best RdRP_4 44.4 1.60e-11 67.2% 19.6%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1khvA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.81 64.0 6.62e-01 81.8% 100.0%
5jxsA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.77 68.0 6.75e-01 92.0% 100.0%
3h5xA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.77 58.0 6.30e-01 77.4% 100.0%
1gx5A03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.70 57.0 5.99e-01 85.4% 100.0%
1hi8A03 3.30.70.1600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 62.0 5.66e-01 100.0% 93.8%
4aukA01 3.30.70.2810 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 34.0 4.29e-01 70.1% 100.0%
4p6qA03 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 36.0 4.22e-01 70.8% 91.6%
3mtkA00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.56 47.0 4.50e-01 91.2% 86.5%
1oaoC03 3.30.1650.10 Alpha Beta › 2-Layer Sandwich › Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 › Bifunctional carbon monoxide dehydrogenase/acetyl-coa synthase(codh/acs), Chain M, domain 3 0.56 39.0 3.59e-01 70.1% 79.5%
1s5jA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.54 48.0 4.59e-01 97.1% 100.0%
1ybtB00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.53 38.0 3.54e-01 73.0% 89.0%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4502075 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.68 36.0 4.84e-01 70.8% 100.0%
4093818 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.67 37.0 4.74e-01 70.1% 97.3%
4156338 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.66 36.0 4.70e-01 70.1% 97.3%
4070496 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.65 37.0 4.68e-01 75.2% 98.7%
4622891 304.117.1.1 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg 0.65 36.0 4.69e-01 70.1% 98.7%
3643305 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 51.0 5.19e-01 89.1% 100.0%
3252343 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 55.0 4.45e-01 97.8% 55.8%
4096485 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 56.0 4.49e-01 99.3% 57.3%
3427907 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 56.0 4.48e-01 99.3% 56.5%
4618808 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 55.0 4.38e-01 98.5% 54.1%
3678489 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.61 54.0 4.80e-01 98.5% 79.0%
3264621 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.55 38.0 4.14e-01 72.3% 100.0%
3209439 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.55 44.0 3.40e-01 86.9% 52.8%
278624 304.48.1.4 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.53 38.0 3.54e-01 73.0% 89.0%
4980947 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.52 34.0 4.03e-01 70.8% 100.0%
3781127 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 44.0 3.84e-01 94.9% 97.2%
4308725 304.48.1.4 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.51 42.0 3.61e-01 89.1% 74.4%
4000490 304.48.1.4 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc 0.50 43.0 3.55e-01 94.9% 65.8%
D4 medium residues 162-213
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ccmA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.79 66.0 4.41e-01 90.4% 41.6%
5u1xA01 1.10.287.940 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel 0.74 54.0 5.67e-01 78.8% 97.8%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.69 62.0 6.01e-01 100.0% 94.7%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.66 46.0 4.75e-01 78.8% 79.2%
1t07A00 1.10.3880.10 Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX 0.65 49.0 4.27e-01 82.7% 84.0%
1u8vB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.65 51.0 3.53e-01 94.2% 82.2%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 55.0 3.30e-01 98.1% 12.5%
1go3F02 6.10.140.10 Special › Helix non-globular › Helix Hairpins › 0.65 39.0 4.13e-01 71.2% 66.0%
4o6yB00 1.20.120.1770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 55.0 3.71e-01 100.0% 44.1%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.64 50.0 4.99e-01 100.0% 85.7%
3g36B00 1.20.890.10 Mainly Alpha › Up-down Bundle › cAMP-dependent Protein Kinase, Chain A › cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain 0.63 43.0 4.36e-01 71.2% 74.5%
2f93B00 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 50.0 5.04e-01 100.0% 90.2%
2plyB01 1.10.10.2770 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 44.0 3.24e-01 75.0% 28.3%
3ro6C01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.63 47.0 3.77e-01 82.7% 99.1%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.62 47.0 4.04e-01 92.3% 50.6%
1a8rA01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.61 51.0 4.41e-01 96.2% 72.9%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.03e-01 71.2% 59.0%
4uqfG01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.61 50.0 5.07e-01 94.2% 100.0%
3ilvA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 46.0 2.89e-01 88.5% 24.5%
1is8A01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.59 50.0 4.81e-01 96.2% 96.7%
4iluA02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.59 47.0 3.79e-01 92.3% 84.7%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.58 47.0 4.46e-01 98.1% 92.6%
1c20A00 1.10.150.60 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain 0.58 40.0 3.09e-01 75.0% 54.7%
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.58 41.0 3.40e-01 78.8% 41.7%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 43.0 3.86e-01 80.8% 94.7%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 47.0 4.67e-01 100.0% 85.2%
1v4gA01 6.10.140.800 Special › Helix non-globular › Helix Hairpins › 0.57 40.0 3.78e-01 78.8% 75.4%
2riqA01 1.10.20.130 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.57 41.0 3.79e-01 76.9% 77.3%
1htmD00 3.90.20.10 Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › 0.57 41.0 3.27e-01 80.8% 37.4%
2a26B01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.57 42.0 4.44e-01 80.8% 100.0%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 47.0 4.59e-01 100.0% 86.2%
4qjfB01 6.10.140.10 Special › Helix non-globular › Helix Hairpins › 0.56 38.0 3.83e-01 71.2% 70.4%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.56 47.0 3.27e-01 100.0% 28.3%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.56 46.0 4.28e-01 100.0% 73.1%
8e9gK01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 43.0 3.80e-01 100.0% 68.1%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 46.0 4.44e-01 100.0% 96.8%
2c35A00 1.20.1250.40 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit 0.54 39.0 3.06e-01 80.8% 82.8%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.54 41.0 4.38e-01 84.6% 100.0%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.54 44.0 3.98e-01 100.0% 64.5%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.54 46.0 3.66e-01 100.0% 45.6%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 44.0 4.10e-01 98.1% 72.2%
2qtfA02 6.10.250.2860 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.54 42.0 4.36e-01 100.0% 95.7%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.54 40.0 3.53e-01 84.6% 51.8%
2z3xA00 6.10.10.80 Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like 0.53 42.0 4.15e-01 92.3% 89.3%
2mpkA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 42.0 3.88e-01 100.0% 78.4%
4fppB01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.52 44.0 4.04e-01 100.0% 73.2%
3fbiD00 1.10.10.1340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Mediator of RNA polymerase II, submodule Med31 (Soh1) 0.51 43.0 3.59e-01 98.1% 53.2%
5fbhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 40.0 2.59e-01 92.3% 33.0%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3272966 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.78 65.0 3.77e-01 92.3% 16.6%
3670388 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 55.0 4.09e-01 80.8% 34.1%
2802499 108.1.1.26 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.74 62.0 5.09e-01 96.2% 84.5%
5047756 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.71 58.0 4.03e-01 98.1% 28.2%
4511742 604.39.1.21 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › 7TM-7TMR_HD 0.70 56.0 3.80e-01 94.2% 34.8%
3698910 3352.1.1.1 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 0.70 54.0 3.14e-01 94.2% 9.3%
3415522 4082.1.1.1 ↗ alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange 0.68 58.0 5.40e-01 100.0% 76.9%
4858809 2004.1.1.2 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 46.0 3.77e-01 78.8% 37.9%
3400507 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.68 47.0 3.67e-01 73.1% 60.9%
3599297 3352.1.1.0 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain 0.67 52.0 3.05e-01 94.2% 9.5%
3450708 3846.1.1.0 ↗ alpha bundles › IcmR › IcmR › IcmR 0.66 47.0 5.02e-01 80.8% 88.9%
3393869 604.6.1.2 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.66 48.0 3.16e-01 76.9% 20.0%
4162480 377.5.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › YggX-like (Pfam 04362) › YggX-like (Pfam 04362) › Iron_traffic 0.65 48.0 4.31e-01 80.8% 89.3%
3255248 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.65 52.0 4.77e-01 90.4% 67.1%
3304318 192.10.1.0 ↗ alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain 0.65 47.0 4.98e-01 98.1% 91.1%
3783702 3869.1.1.1 ↗ alpha arrays › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Ribosomal_L27_C 0.65 56.0 3.61e-01 100.0% 27.3%
3392399 2004.1.1.139 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Torsin 0.64 51.0 3.18e-01 92.3% 16.1%
3925160 9.26.1.0 ↗ beta barrels › Lipocalins/Streptavidin 0.64 53.0 3.61e-01 92.3% 26.3%
3829206 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.64 54.0 4.59e-01 98.1% 57.6%
3812167 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.64 49.0 4.02e-01 84.6% 87.0%
4945303 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.63 48.0 2.99e-01 86.5% 29.4%
3312749 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.62 50.0 4.13e-01 96.2% 48.6%
4978047 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.62 43.0 2.65e-01 78.8% 12.5%
3262410 650.1.1.0 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.61 49.0 4.37e-01 100.0% 61.3%
3956498 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 46.0 2.87e-01 84.6% 54.6%
4957171 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.61 47.0 4.47e-01 98.1% 69.2%
3816078 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 49.0 3.80e-01 88.5% 75.8%
4387003 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.60 46.0 2.99e-01 86.5% 67.8%
4108348 230.1.1.2 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GTP_cyclohydroI 0.60 48.0 3.37e-01 94.2% 60.0%
2772442 159.1.2.3 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › dATP-dGTP_PPHyd 0.60 45.0 3.64e-01 80.8% 45.5%
4408580 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.60 43.0 4.59e-01 100.0% 91.1%
5019353 2498.1.1.10 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.59 50.0 3.30e-01 96.2% 22.7%
3744635 568.1.1.4 ↗ few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related › CHCH 0.59 42.0 3.91e-01 80.8% 57.5%
4020163 216.1.1.1 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con 0.57 42.0 3.02e-01 76.9% 36.0%
3330916 3846.1.1.0 ↗ alpha bundles › IcmR › IcmR › IcmR 0.57 47.0 4.69e-01 100.0% 89.1%
3437734 192.4.1.0 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.57 42.0 3.94e-01 78.8% 60.0%
3938667 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.57 47.0 4.05e-01 100.0% 70.0%
4366957 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.56 40.0 4.28e-01 80.8% 91.1%
5073218 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.43e-01 84.6% 45.6%
3949634 148.1.3.23 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_6 0.55 43.0 3.57e-01 96.2% 45.2%
4674 192.7.1.1 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › FemAB 0.54 47.0 4.41e-01 100.0% 95.4%
3252860 609.1.1.0 ↗ alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase 0.54 47.0 3.48e-01 100.0% 78.6%
5027410 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.54 40.0 3.31e-01 80.8% 61.1%
3256686 568.1.1.0 ↗ few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related 0.54 44.0 4.37e-01 100.0% 87.3%
3354385 3755.1.1.22 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › DUF3475 0.54 46.0 3.13e-01 100.0% 26.3%
3740829 192.19.1.3 ↗ alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like › Wbp11 0.53 41.0 3.61e-01 84.6% 60.0%
5061613 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.35e-01 82.7% 67.1%
3424167 3826.1.1.84 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF7797 0.52 43.0 3.73e-01 100.0% 58.7%