hypothetical_protein_2

Euk-Vir

Hubei_tombus-like_virus_13

hypothetical_protein_2__YP_009337096__Hubei_tombus-like_virus_13__1923259

Identity

76.9 mean pLDDT

Hubei_tombus-like_virus_13

TaxID: 1923259

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 14-25_42-71_127-161_256-275

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2hfzA01	3.30.70.2840	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Flavivirus RNA-directed RNA polymerase, thumb domain	0.55	34.0	3.61e-01	97.9%	68.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5028450	331.1.1.6 ↗	a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378	0.53	31.0	3.54e-01	96.9%	80.0%

D2 medium residues 72-96_227-255

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wpbG01	1.10.287.680	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.55	37.0	3.74e-01	70.4%	64.8%
7c5wA01	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.54	42.0	3.13e-01	85.2%	53.4%
1twfB04	3.90.1110.10	Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2	0.53	36.0	2.56e-01	70.4%	54.8%
4kzsA02	6.10.140.1870	Special › Helix non-globular › Helix Hairpins ›	0.53	40.0	3.70e-01	81.5%	98.6%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4378	4359.1.1.1 ↗	alpha duplicates or obligate multimers › YfbU-like, N-terminal subdomain › YfbU-like, N-terminal subdomain › YfbU-like, N-terminal subdomain › YfbU	0.63	37.0	3.74e-01	74.1%	56.4%
4981595	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.59	44.0	3.60e-01	79.6%	86.0%

D3 medium residues 97-126_162-186

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ihpB05	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.58	41.0	4.21e-01	81.8%	75.9%
1lp1A00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.53	37.0	3.75e-01	76.4%	72.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3262552	198.1.1.2 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1	0.57	39.0	3.56e-01	83.6%	53.3%
3248091	198.1.1.2 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1	0.57	38.0	3.37e-01	85.5%	45.9%

D4 medium residues 187-226_276-381

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	73.4	2.20e-20	71.9%	21.2%

D5 medium residues 382-422_436-480_498-510

PDB