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hypothetical_protein_2

Euk-Vir

Changjiang_tombus-like_virus_1

hypothetical_protein_2__YP_009337123__Changjiang_tombus-like_virus_1__1922802

Identity

Accession:
YP_009337123 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

78.1 mean pLDDT

Taxonomy

TaxID: 1922802

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-68_93-204
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fy1100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 76.0 6.37e-01 100.0% 75.1%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 74.0 6.31e-01 100.0% 72.6%
1c8nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 74.0 6.18e-01 100.0% 75.8%
3jb8A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 73.0 6.52e-01 100.0% 86.5%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.78 73.0 6.18e-01 100.0% 76.4%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 5.59e-01 100.0% 67.8%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.77 72.0 6.06e-01 100.0% 76.6%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 71.0 5.97e-01 100.0% 77.5%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 6.46e-01 100.0% 83.7%
5yl1A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.76 72.0 6.42e-01 100.0% 91.2%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 71.0 6.60e-01 100.0% 87.9%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 71.0 5.42e-01 100.0% 51.7%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.75 71.0 6.23e-01 100.0% 86.8%
6mrmC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 70.0 6.42e-01 100.0% 87.6%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.74 69.0 6.17e-01 100.0% 80.4%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.73 67.0 5.39e-01 100.0% 70.8%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 66.0 5.15e-01 100.0% 62.1%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 67.0 6.26e-01 100.0% 86.5%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 64.0 4.84e-01 100.0% 70.6%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.69 46.0 5.15e-01 100.0% 89.2%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.69 48.0 5.28e-01 100.0% 86.7%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 64.0 5.11e-01 100.0% 72.9%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 64.0 5.16e-01 100.0% 61.1%
2y26A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 62.0 4.57e-01 100.0% 43.6%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 62.0 5.16e-01 100.0% 64.9%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 62.0 5.40e-01 100.0% 71.3%
1o6uA02 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.66 48.0 5.36e-01 100.0% 96.2%
1a6cA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 61.0 4.49e-01 100.0% 43.4%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 61.0 4.89e-01 100.0% 60.0%
2luwA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.65 44.0 4.96e-01 100.0% 93.1%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 59.0 5.26e-01 100.0% 84.0%
5buvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 42.0 3.89e-01 100.0% 52.0%
4a7kA02 2.60.120.990 Mainly Beta › Sandwich › Jelly Rolls › 0.63 50.0 3.88e-01 100.0% 38.5%
4xvhA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 42.0 4.68e-01 100.0% 90.7%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 5.10e-01 100.0% 97.4%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 50.0 4.62e-01 100.0% 69.7%
1hx6A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 4.65e-01 100.0% 83.0%
4kg0A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.57 53.0 5.09e-01 100.0% 100.0%
3ks7A01 2.60.120.1570 Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain 0.57 51.0 4.45e-01 100.0% 89.6%
1l9mA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 34.0 3.87e-01 100.0% 81.4%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 4.53e-01 100.0% 84.1%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 36.0 4.34e-01 93.4% 100.0%
7uzsX04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 33.0 3.85e-01 100.0% 82.3%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 4.68e-01 100.0% 91.5%
1xsqA00 2.60.120.480 Mainly Beta › Sandwich › Jelly Rolls › Ureidoglycolate hydrolase 0.55 36.0 3.50e-01 100.0% 58.2%
1s4cC00 2.60.120.370 Mainly Beta › Sandwich › Jelly Rolls › YhcH/YjgK/YiaL 0.55 40.0 3.90e-01 100.0% 70.1%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 45.0 4.56e-01 100.0% 90.3%
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.53 47.0 3.62e-01 100.0% 75.1%
2fctB00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 46.0 3.65e-01 100.0% 52.2%
1gnyA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 47.0 4.55e-01 100.0% 92.2%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.85e-01 100.0% 86.1%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 4.26e-01 100.0% 83.4%
1g0dA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 4.07e-01 97.1% 94.5%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
328688 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.79 74.0 6.31e-01 100.0% 72.6%
1866058 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.78 73.0 6.52e-01 100.0% 86.5%
1234 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.77 72.0 6.34e-01 100.0% 87.0%
1232 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.77 72.0 6.28e-01 100.0% 87.8%
289259 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.76 71.0 5.91e-01 100.0% 76.4%
5048013 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.76 49.0 5.84e-01 100.0% 94.7%
1724852 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.75 71.0 6.59e-01 100.0% 87.3%
1758310 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.75 71.0 6.08e-01 100.0% 72.5%
4014484 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 48.0 5.57e-01 100.0% 90.0%
5039382 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 46.0 5.69e-01 98.5% 100.0%
4972683 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 47.0 5.55e-01 100.0% 92.6%
5044901 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 48.0 5.17e-01 100.0% 79.1%
3596404 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.72 55.0 6.05e-01 97.8% 98.2%
3919527 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 47.0 5.33e-01 100.0% 86.7%
3486965 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 48.0 4.64e-01 100.0% 61.3%
2099164 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.71 66.0 5.15e-01 100.0% 62.1%
5026423 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 47.0 5.26e-01 100.0% 86.7%
2048473 10.2.1.44 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid 0.71 65.0 5.28e-01 100.0% 73.4%
5039912 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 48.0 5.16e-01 100.0% 80.9%
5060870 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 50.0 5.66e-01 100.0% 94.3%
3796384 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.71 47.0 4.96e-01 100.0% 74.4%
3597620 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 48.0 4.68e-01 100.0% 63.3%
3815174 10.32.1.231 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › APD1-4_M 0.70 54.0 5.88e-01 100.0% 95.7%
5053826 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 48.0 5.33e-01 100.0% 87.3%
3276836 10.4.1.25 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF26736 0.69 43.0 5.30e-01 100.0% 100.0%
4025027 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 48.0 5.29e-01 100.0% 88.2%
3868830 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.69 48.0 4.55e-01 100.0% 60.6%
3267384 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 47.0 4.96e-01 100.0% 80.0%
5049599 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 51.0 5.38e-01 100.0% 88.3%
3241031 10.32.1.72 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD 0.67 49.0 5.34e-01 100.0% 89.6%
3700433 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.67 47.0 5.19e-01 100.0% 89.1%
4243265 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.67 48.0 4.57e-01 100.0% 63.1%
4960627 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 48.0 5.15e-01 100.0% 87.8%
4958335 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 45.0 4.27e-01 100.0% 57.6%
5041320 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 45.0 5.09e-01 100.0% 90.5%
5073784 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 49.0 5.39e-01 100.0% 95.5%
4073646 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.65 45.0 4.97e-01 100.0% 88.2%
3734028 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.65 48.0 3.81e-01 100.0% 37.2%
4944037 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 60.0 5.79e-01 100.0% 97.3%
5043080 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.63 43.0 4.78e-01 97.8% 87.3%
3593967 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 52.0 5.48e-01 98.5% 99.2%
4968966 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 47.0 4.96e-01 100.0% 89.6%
3725557 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 48.0 5.04e-01 97.8% 91.2%
3243946 10.32.1.228 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SID-1_RNA_chan 0.60 50.0 5.03e-01 100.0% 88.9%
5073687 10.13.1.1 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.58 30.0 3.46e-01 100.0% 68.4%
4012761 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 49.0 3.94e-01 100.0% 81.9%
4389560 10.9.1.1 beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV 0.54 49.0 4.68e-01 100.0% 86.5%
1790278 10.9.1.1 beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV 0.53 46.0 4.52e-01 100.0% 85.4%
5046846 10.13.1.1 beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.53 31.0 2.91e-01 100.0% 46.1%
3469931 10.2.1.39 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monoox_C 0.52 45.0 4.29e-01 94.9% 89.4%
1147 10.32.1.15 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_15 0.52 47.0 4.55e-01 100.0% 92.2%
3182993 10.32.1.28 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.51 46.0 3.83e-01 100.0% 94.6%
D2 medium residues 28-44_69-92
PDB
Domain cluster: representative
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4927838 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 53.0 4.71e-01 97.6% 71.7%
3651174 221.1.1.172 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_UBP8 0.51 36.0 3.39e-01 78.0% 78.2%