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hypothetical_protein_2
Euk-VirBeihai_sobemo-like_virus_12
hypothetical_protein_2__YP_009337145__Beihai_sobemo-like_virus_12__1922683
Identity
- Accession:
- YP_009337145 ↗
- Protein ID:
- hypothetical_protein_2
- Kingdom:
- euk
Quality
85.8
mean pLDDT
Cluster
View cluster (85 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 297-361
Domain cluster:
rep: hypothetical_protein_2__YP_009330046__Hubei_sobemo-like_virus_16__1923201__D209-277
D2
medium
residues 1-72
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1re0B02 | 1.10.1000.11 | Mainly Alpha › Orthogonal Bundle › Arf Nucleotide-binding Site Opener; domain 2 › Arf Nucleotide-binding Site Opener,domain 2 | 0.61 | 37.0 | 3.20e-01 | 100.0% | 38.3% |
| 3h90A02 | 3.30.70.1350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain | 0.59 | 35.0 | 3.35e-01 | 95.8% | 51.2% |
| 1cmzA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.54 | 45.0 | 4.37e-01 | 93.1% | 97.5% |
| 2g7gA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 47.0 | 3.44e-01 | 98.6% | 68.0% |
| 2dlrA00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.53 | 45.0 | 3.65e-01 | 98.6% | 68.5% |
| 1bg1A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 45.0 | 3.84e-01 | 98.6% | 90.2% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.52 | 45.0 | 3.54e-01 | 98.6% | 61.9% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.52 | 38.0 | 3.79e-01 | 79.2% | 100.0% |
| 2d9jA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.52 | 42.0 | 4.14e-01 | 93.1% | 97.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3717271 | 109.4.1.501 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UME | 0.59 | 42.0 | 2.33e-01 | 75.0% | 36.0% |
| 3683051 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.57 | 48.0 | 3.09e-01 | 98.6% | 84.2% |
| 3255762 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.56 | 47.0 | 4.01e-01 | 98.6% | 86.6% |
| 3541577 | 101.1.2.301 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF4616 | 0.53 | 38.0 | 3.67e-01 | 98.6% | 67.5% |
| 3997742 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.51 | 31.0 | 3.15e-01 | 95.8% | 58.7% |
D3
medium
residues 73-135_163-223
D4
medium
residues 136-162_224-296