hypothetical_protein_2

Euk-Vir

Changjiang_tombus-like_virus_3

hypothetical_protein_2__YP_009337297__Changjiang_tombus-like_virus_3__1922817

Identity

83.1 mean pLDDT

Changjiang_tombus-like_virus_3

TaxID: 1922817

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 361-477

PDB

Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	67.4	1.50e-18	100.0%	25.1%

D2 medium residues 11-74_138-179_221-276

PDB

Domain cluster: representative

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	32.9	4.30e-08	37.6%	11.9%
PF00998.29	RdRP_3	64.3	1.30e-17	35.8%	11.7%
PF00998.29	RdRP_3	48.2	1.00e-12	30.2%	9.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nscA01	3.30.70.1050	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain	0.54	23.0	3.13e-01	89.5%	78.2%

D3 medium residues 75-137

PDB

Domain cluster: rep: p86_protein__NP_945123__Pelargonium_flower_break_virus__35291__D330-391

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	42.0	7.40e-11	95.2%	10.5%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3k1hA00	3.30.1120.180	Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076	0.55	39.0	3.30e-01	76.2%	64.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3740788	109.12.1.2 ↗	alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › Ku_PK_bind	0.50	36.0	2.90e-01	79.4%	83.4%

D4 medium residues 180-220_277-360

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	118.3	5.70e-34	67.2%	17.3%
PF00998.29	RdRP_3	45.3	7.40e-12	32.8%	8.0%