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hypothetical_protein_2
Euk-VirChangjiang_tombus-like_virus_5
hypothetical_protein_2__YP_009337432__Changjiang_tombus-like_virus_5__1922819
Identity
- Accession:
- YP_009337432 ↗
- Protein ID:
- hypothetical_protein_2
- Kingdom:
- euk
Quality
88.4
mean pLDDT
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 258-382
Domain cluster:
rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 85.2 | 6.20e-24 | 100.0% | 26.3% |
D2
medium
residues 23-82_137-181
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 75.7 | 4.50e-21 | 59.1% | 11.9% |
| PF00998.29 | RdRP_3 | 31.9 | 8.50e-08 | 47.6% | 9.7% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r7rA05 | 1.10.357.80 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.67 | 60.0 | 5.09e-01 | 100.0% | 71.6% |
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 18.0 | 3.08e-01 | 91.4% | 85.7% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 37.0 | 3.85e-01 | 83.8% | 77.1% |
| 3ufiA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 31.0 | 3.01e-01 | 97.1% | 48.8% |
D3
medium
residues 83-136_182-256
Domain cluster:
rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 81.9 | 6.20e-23 | 58.9% | 15.8% |
| PF00998.29 | RdRP_3 | 74.9 | 7.80e-21 | 41.1% | 10.9% |