hypothetical_protein_2

Euk-Vir

Sanxia_tombus-like_virus_1

hypothetical_protein_2__YP_009337621__Sanxia_tombus-like_virus_1__1923385

Identity

86.1 mean pLDDT

Sanxia_tombus-like_virus_1

TaxID: 1923385

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 384-512

PDB

Domain cluster: rep: P95_replicase__YP_009259667__Pelargonium_leaf_curl_virus__35280__D527-559_693-852

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	71.3	9.60e-20	96.9%	25.9%

D2 medium residues 11-78

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1i27A00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.50	26.0	2.55e-01	91.2%	46.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3353195	304.9.1.1 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1	0.54	23.0	2.60e-01	97.1%	46.3%

D3 medium residues 79-194_233-302

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009336562__Hubei_tombus-like_virus_9__1923296__D77-195_233-294

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	35.5	7.30e-09	62.4%	21.6%
PF00998.29	RdRP_3	44.5	1.30e-11	39.8%	13.2%

D4 medium residues 195-232_303-383

PDB

Domain cluster: rep: hypothetical_protein_1__YP_009337274__Changjiang_tombus-like_virus_14__1922807__D158-196_253-344

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00998.29 best	RdRP_3	90.0	2.10e-25	68.1%	16.5%