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hypothetical_protein_2

Euk-Vir

Big_Cypress_virus_Viruses.

hypothetical_protein_2__YP_009351822__Big_Cypress_virus_Viruses.__X

Identity

Accession:
YP_009351822 ↗
Protein ID:
hypothetical_protein_2
Kingdom:
euk

Quality

59.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 104-123_170-288
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16506.11 best DiSB-ORF2_chro 69.8 5.70e-19 87.1% 43.7%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.65 34.0 4.69e-01 87.8% 100.0%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.65 33.0 4.68e-01 87.8% 100.0%
4gu4A01 2.10.25.20 Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 0.57 17.0 2.99e-01 87.1% 79.1%
3qdrB00 2.30.30.970 Mainly Beta › Roll › SH3 type barrels. › 0.55 21.0 3.19e-01 82.7% 89.8%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 33.0 3.78e-01 95.0% 86.4%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 32.0 3.73e-01 71.2% 88.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3738365 2.1.1.128 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Arb1 0.51 30.0 3.17e-01 95.0% 61.5%
D2 medium residues 289-379
PDB
D3 medium residues 380-460
PDB