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hypothetical_protein_3
Euk-VirWenzhou_tombus-like_virus_3
hypothetical_protein_3__YP_009342276__Wenzhou_tombus-like_virus_3__1923673
Identity
- Accession:
- YP_009342276 ↗
- Protein ID:
- hypothetical_protein_3
- Kingdom:
- euk
Quality
81.2
mean pLDDT
Cluster
View cluster (99 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 23-94
Domain cluster:
representative
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5012054 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.60 | 40.0 | 4.06e-01 | 95.8% | 70.0% |
D2
medium
residues 95-206
Domain cluster:
rep: hypothetical_protein_2__YP_009337123__Changjiang_tombus-like_virus_1__1922802__D45-68_93-204
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 5.66e-01 | 100.0% | 54.3% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 66.0 | 5.60e-01 | 100.0% | 60.2% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 30.0 | 3.34e-01 | 83.0% | 55.4% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 29.0 | 3.07e-01 | 83.9% | 59.4% |
| 1yqhA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 31.0 | 3.23e-01 | 99.1% | 63.5% |
| 3ks7A01 | 2.60.120.1570 | Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain | 0.51 | 45.0 | 3.71e-01 | 98.2% | 61.8% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 29.0 | 3.01e-01 | 97.3% | 59.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3234346 | 10.12.1.9 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC | 0.57 | 39.0 | 2.88e-01 | 99.1% | 24.6% |
| 5020590 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.28e-01 | 98.2% | 44.2% |
| 4928608 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.51 | 40.0 | 3.58e-01 | 84.8% | 100.0% |
| 3179969 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.51 | 30.0 | 3.18e-01 | 83.9% | 65.0% |