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hypothetical_protein_A190_gp086
Euk-VirEuropean_catfish_virus
hypothetical_protein_A190_gp086__YP_006347677__European_catfish_virus__84739
Identity
- Accession:
- YP_006347677 ↗
- Protein ID:
- hypothetical_protein_A190_gp086
- Kingdom:
- euk
Quality
56.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
European_catfish_virus
TaxID: 84739
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 28-75_129-471
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05686.19 best | Glyco_transf_90 | 74.7 | 9.50e-21 | 78.3% | 55.6% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.59 | 14.0 | 2.65e-01 | 98.2% | 64.4% |
| 3vpbB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 15.0 | 2.79e-01 | 92.3% | 84.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1870479 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.86 | 46.0 | 6.29e-01 | 83.1% | 95.4% |
| 2099349 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.83 | 46.0 | 6.28e-01 | 83.4% | 98.6% |
| 3996025 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.83 | 35.0 | 5.70e-01 | 82.1% | 98.8% |
| 3691290 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.83 | 43.0 | 6.19e-01 | 84.9% | 100.0% |
| 3823187 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.80 | 42.0 | 5.08e-01 | 82.9% | 73.5% |
| 3381511 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.79 | 42.0 | 5.50e-01 | 82.9% | 86.8% |
| 3206188 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.75 | 44.0 | 5.79e-01 | 82.4% | 97.8% |
| 4199534 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.75 | 53.0 | 6.03e-01 | 91.6% | 92.3% |
| 3185326 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.72 | 45.0 | 5.54e-01 | 80.1% | 92.8% |
| 5028678 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.69 | 40.0 | 5.33e-01 | 77.7% | 100.0% |
| 4611041 | 7512.1.1.17 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_90 | 0.64 | 45.0 | 5.08e-01 | 94.4% | 88.9% |
| None | — | 0.60 | 52.0 | 4.53e-01 | 90.0% | 68.7% | |
| 3341918 | 7512.1.1.33 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_41 | 0.60 | 52.0 | 4.99e-01 | 90.0% | 90.3% |
| None | — | 0.60 | 52.0 | 4.51e-01 | 90.0% | 69.0% | |
| 3811651 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.60 | 52.0 | 4.35e-01 | 90.3% | 89.3% |
| 3685338 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.55 | 42.0 | 4.67e-01 | 83.6% | 93.8% |
D2
medium
residues 76-128
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zarA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.62 | 47.0 | 3.84e-01 | 90.6% | 44.3% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 44.0 | 3.37e-01 | 84.9% | 83.7% |
| 2b3tA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.55 | 43.0 | 3.78e-01 | 88.7% | 85.7% |
| 2cw7A02 | 1.10.10.1010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV | 0.55 | 42.0 | 3.14e-01 | 84.9% | 67.8% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.52 | 40.0 | 2.82e-01 | 86.8% | 87.0% |
| 3upuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.10e-01 | 100.0% | 77.8% |
| 1vx7Q02 | 3.30.60.300 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.51 | 30.0 | 3.42e-01 | 86.8% | 90.6% |
| 2oxaA01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.51 | 41.0 | 2.48e-01 | 88.7% | 38.1% |
| 4a17H02 | 3.30.60.300 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.50 | 29.0 | 3.22e-01 | 86.8% | 74.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3242411 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.59 | 47.0 | 3.85e-01 | 94.3% | 68.2% |
| 3730127 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.57 | 46.0 | 2.98e-01 | 98.1% | 70.7% |
| 4085259 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.57 | 49.0 | 3.15e-01 | 98.1% | 50.6% |
| 3942342 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.54 | 44.0 | 3.45e-01 | 96.2% | 64.6% |
| 3913396 | 3930.1.1.5 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › zf-RVT | 0.54 | 45.0 | 3.09e-01 | 90.6% | 76.1% |
| 3815453 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.53 | 42.0 | 3.56e-01 | 88.7% | 55.6% |
| 4954531 | 2004.1.1.152 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KAP_NTPase | 0.53 | 44.0 | 2.96e-01 | 98.1% | 75.7% |
| 3990747 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.52 | 42.0 | 3.43e-01 | 94.3% | 67.3% |
| 3253557 | 304.7.1.3 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Pro-kuma_activ | 0.52 | 42.0 | 3.45e-01 | 90.6% | 87.0% |
| 3932080 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 3.24e-01 | 90.6% | 54.3% |
| 3763541 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 32.0 | 3.55e-01 | 96.2% | 97.1% |
| 3675137 | 2003.1.5.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase | 0.50 | 44.0 | 2.99e-01 | 96.2% | 44.9% |
| 5059917 | 101.1.2.279 ↗ | alpha arrays › HTH › HTH › winged helix domain › AbiEi_4 | 0.50 | 40.0 | 3.83e-01 | 92.5% | 76.9% |
D3
medium
residues 495-562
D4
medium
residues 563-708
D5
medium
residues 709-722_780-823