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hypothetical_protein_A190_gp133

Euk-Vir

European_catfish_virus

hypothetical_protein_A190_gp133__YP_006347724__European_catfish_virus__84739

Identity

Accession:
YP_006347724 ↗
Protein ID:
hypothetical_protein_A190_gp133
Kingdom:
euk

Quality

74.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-103
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19203.6 best DUF5875 242.6 5.50e-72 100.0% 45.2%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m70I00 1.20.5.4130 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 44.0 4.36e-01 71.8% 88.9%
1szhA02 1.10.150.370 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain 0.57 37.0 3.99e-01 99.0% 80.5%
2dznF00 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.55 33.0 3.88e-01 71.8% 88.4%
3vwaA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 41.0 3.74e-01 81.6% 94.4%
2vzbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 45.0 3.88e-01 100.0% 58.1%
7c4sB01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.53 46.0 3.43e-01 99.0% 51.1%
2l1iA00 3.30.70.2330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 36.0 3.41e-01 73.8% 69.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3584903 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.58 53.0 4.58e-01 100.0% 67.7%
3243237 5001.1.1.33 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh 0.55 49.0 3.49e-01 100.0% 61.0%
3758051 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 34.0 3.42e-01 92.2% 63.8%
3704691 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 41.0 3.42e-01 86.4% 72.0%
D2 medium residues 120-221
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19203.6 best DUF5875 228.8 8.70e-68 100.0% 44.7%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zssA02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 44.0 4.87e-01 99.0% 98.7%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.54 40.0 3.59e-01 81.4% 67.3%
2g3bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 46.0 3.83e-01 100.0% 72.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3934651 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.63 48.0 3.57e-01 82.4% 73.5%
3849951 5054.1.1.2 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.57 44.0 3.20e-01 83.3% 92.8%
3661643 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.54 28.0 3.42e-01 94.1% 80.0%
4879693 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.54 40.0 3.71e-01 79.4% 94.2%
3345779 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 46.0 3.92e-01 100.0% 60.6%