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hypothetical_protein_A190_gp133
Euk-VirEuropean_catfish_virus
hypothetical_protein_A190_gp133__YP_006347724__European_catfish_virus__84739
Identity
- Accession:
- YP_006347724 ↗
- Protein ID:
- hypothetical_protein_A190_gp133
- Kingdom:
- euk
Quality
74.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Ranavirus›
European_catfish_virus
TaxID: 84739
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-103
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19203.6 best | DUF5875 | 242.6 | 5.50e-72 | 100.0% | 45.2% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.63 | 44.0 | 4.36e-01 | 71.8% | 88.9% |
| 1szhA02 | 1.10.150.370 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Caenorhabditis elegans Her-1, C-terminal domain | 0.57 | 37.0 | 3.99e-01 | 99.0% | 80.5% |
| 2dznF00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 33.0 | 3.88e-01 | 71.8% | 88.4% |
| 3vwaA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 41.0 | 3.74e-01 | 81.6% | 94.4% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 45.0 | 3.88e-01 | 100.0% | 58.1% |
| 7c4sB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 46.0 | 3.43e-01 | 99.0% | 51.1% |
| 2l1iA00 | 3.30.70.2330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 36.0 | 3.41e-01 | 73.8% | 69.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3584903 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.58 | 53.0 | 4.58e-01 | 100.0% | 67.7% |
| 3243237 | 5001.1.1.33 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh | 0.55 | 49.0 | 3.49e-01 | 100.0% | 61.0% |
| 3758051 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 34.0 | 3.42e-01 | 92.2% | 63.8% |
| 3704691 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 41.0 | 3.42e-01 | 86.4% | 72.0% |
D2
medium
residues 120-221
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19203.6 best | DUF5875 | 228.8 | 8.70e-68 | 100.0% | 44.7% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zssA02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 44.0 | 4.87e-01 | 99.0% | 98.7% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.54 | 40.0 | 3.59e-01 | 81.4% | 67.3% |
| 2g3bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 46.0 | 3.83e-01 | 100.0% | 72.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934651 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.63 | 48.0 | 3.57e-01 | 82.4% | 73.5% |
| 3849951 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.57 | 44.0 | 3.20e-01 | 83.3% | 92.8% |
| 3661643 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.54 | 28.0 | 3.42e-01 | 94.1% | 80.0% |
| 4879693 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.54 | 40.0 | 3.71e-01 | 79.4% | 94.2% |
| 3345779 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 46.0 | 3.92e-01 | 100.0% | 60.6% |