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hypothetical_protein_A3303_gp006

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp006__YP_009238511__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238511 ↗
Protein ID:
hypothetical_protein_A3303_gp006
Kingdom:
euk

Quality

60.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-60
PDB
D2 medium residues 61-114
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.70 51.0 4.80e-01 96.3% 62.9%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 5.02e-01 98.1% 78.7%
5hmpB02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 49.0 4.78e-01 94.4% 76.6%
2c5sA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.62 51.0 3.61e-01 100.0% 29.6%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.62 45.0 4.27e-01 96.3% 64.7%
3bn0A00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.61 46.0 3.87e-01 100.0% 47.4%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 51.0 4.47e-01 100.0% 65.1%
6do0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 3.80e-01 90.7% 46.0%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.60 54.0 4.44e-01 100.0% 89.4%
3buxB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 48.0 4.06e-01 100.0% 53.9%
1xxaC00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 45.0 4.17e-01 100.0% 64.4%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.21e-01 100.0% 62.1%
3cjsA00 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.57 37.0 3.72e-01 96.3% 63.8%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.24e-01 100.0% 70.2%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.56 47.0 4.16e-01 100.0% 78.8%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 4.05e-01 98.1% 64.9%
5dx9A01 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.56 48.0 4.44e-01 100.0% 97.2%
1wr8A02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.56 49.0 4.53e-01 100.0% 92.8%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 4.24e-01 94.4% 80.0%
3fvcA02 1.20.5.1890 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 44.0 3.73e-01 94.4% 94.0%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.87e-01 98.1% 58.6%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.21e-01 100.0% 73.9%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.32e-01 96.3% 81.2%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.39e-01 90.7% 43.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 3.99e-01 100.0% 62.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.92e-01 100.0% 60.0%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 47.0 3.57e-01 100.0% 49.2%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 46.0 4.09e-01 100.0% 68.3%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 37.0 3.24e-01 87.0% 44.9%
1q36A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.54 44.0 3.09e-01 100.0% 26.3%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.74e-01 100.0% 55.2%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.88e-01 96.3% 72.0%
5unaD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 43.0 3.05e-01 100.0% 47.1%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.80e-01 98.1% 70.1%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.92e-01 96.3% 77.4%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.63e-01 88.9% 61.3%
4bpe700 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.47e-01 90.7% 78.2%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.53 43.0 3.12e-01 100.0% 29.3%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.63e-01 100.0% 55.9%
4hkqA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.52 40.0 3.13e-01 96.3% 35.4%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.44e-01 100.0% 50.5%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.23e-01 98.1% 46.9%
3awiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.69e-01 94.4% 77.2%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.64e-01 100.0% 62.4%
1xhhA00 2.60.40.1900 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-microseminoprotein (PSP94) domain 0.51 39.0 3.40e-01 98.1% 52.7%
5xctB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.40e-01 98.1% 61.6%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 3.37e-01 100.0% 49.0%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3216952 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.08e-01 100.0% 70.6%
4954889 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.64 52.0 4.98e-01 100.0% 80.0%
3497894 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.64 52.0 4.59e-01 96.3% 60.2%
3555783 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.64 52.0 4.40e-01 96.3% 53.8%
3600806 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 53.0 5.09e-01 98.1% 86.2%
3590297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.43e-01 100.0% 54.0%
3484048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 48.0 4.50e-01 96.3% 68.6%
4946048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 48.0 4.33e-01 88.9% 62.5%
4956853 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 4.15e-01 100.0% 56.5%
3167236 148.1.3.31 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM4_WHD 0.60 51.0 4.40e-01 96.3% 63.5%
4015092 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.73e-01 100.0% 75.7%
3768837 108.1.1.10 alpha arrays › EF-hand › EF-hand-related › EF-hand › Cbl_N2 0.59 48.0 4.04e-01 100.0% 53.3%
4995085 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 50.0 4.22e-01 98.1% 63.2%
3444208 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 43.0 4.56e-01 96.3% 100.0%
4933236 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 3.98e-01 100.0% 49.1%
5053142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 46.0 3.71e-01 94.4% 42.5%
3743678 148.1.3.41 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C 0.57 49.0 4.56e-01 100.0% 77.1%
5048498 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 45.0 3.46e-01 98.1% 37.4%
3167532 101.1.2.377 alpha arrays › HTH › HTH › winged helix domain › MCM5_C 0.57 48.0 4.21e-01 100.0% 62.4%
5028427 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 42.0 3.54e-01 90.7% 43.8%
5048525 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.22e-01 100.0% 69.4%
4927192 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.01e-01 100.0% 55.8%
5010717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.36e-01 100.0% 73.3%
5003975 101.1.2.944 alpha arrays › HTH › HTH › winged helix domain › PF26486 0.56 43.0 4.14e-01 98.1% 75.4%
4011314 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.56 48.0 4.29e-01 100.0% 92.5%
3608085 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.56 47.0 4.02e-01 98.1% 59.6%
3595754 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.56 46.0 4.03e-01 96.3% 60.0%
5063930 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 3.73e-01 88.9% 56.7%
4941699 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 3.80e-01 90.7% 60.0%
5031076 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 40.0 3.32e-01 90.7% 39.1%
5028122 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 39.0 3.08e-01 90.7% 32.3%
3346483 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 41.0 3.66e-01 98.1% 54.1%
3931130 4300.1.1.0 beta complex topology › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like › Viral glycoprotein ectodomain-like 0.55 44.0 3.35e-01 96.3% 45.3%
4068860 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.55 47.0 3.69e-01 100.0% 48.3%
4625029 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.55 47.0 3.84e-01 100.0% 53.3%
4125762 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.54 39.0 3.18e-01 90.7% 35.4%
2685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 4.03e-01 100.0% 64.0%
3958566 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.54 39.0 3.42e-01 90.7% 48.9%
4994340 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.54 40.0 3.12e-01 90.7% 32.9%
4972865 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.54 42.0 3.45e-01 96.3% 44.2%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 38.0 3.29e-01 90.7% 45.0%
3613664 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 3.63e-01 100.0% 51.4%
4997662 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.44e-01 96.3% 46.4%
4026717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.86e-01 96.3% 72.9%
4943641 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.83e-01 96.3% 70.7%
5035624 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.52 40.0 3.65e-01 96.3% 60.0%
5000704 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.74e-01 100.0% 65.6%
3738688 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.52 42.0 3.93e-01 100.0% 76.0%
5052010 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.78e-01 98.1% 71.2%
4943354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 41.0 3.76e-01 98.1% 73.4%
5049455 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.52 43.0 3.31e-01 100.0% 38.6%
4976651 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.87e-01 98.1% 82.9%
4928394 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.84e-01 96.3% 77.3%
5051554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.58e-01 96.3% 62.5%
5049740 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 2.73e-01 100.0% 19.6%
1841558 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.50 42.0 3.50e-01 100.0% 50.9%