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hypothetical_protein_A3303_gp060

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp060__YP_009238565__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238565 ↗
Protein ID:
hypothetical_protein_A3303_gp060
Kingdom:
euk

Quality

79.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-55
PDB
Domain cluster: rep: hypothetical_protein_GMAR_ORF278__YP_009310395__Golden_Marseillevirus__1720526__D13-65
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00646.39 best F-box 20.9 3.60e-04 77.4% 79.1%
PF12937.13 F-box-like 30.1 4.60e-07 75.5% 72.3%
D2 medium residues 61-209
PDB
Domain cluster: rep: hypothetical_protein_A3303_gp118__YP_009238623__Brazilian_marseillevirus__1813599__D46-188
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.75 65.0 4.54e-01 90.6% 38.6%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.67 59.0 4.62e-01 92.6% 69.2%
2zxkA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.65 48.0 3.92e-01 75.2% 73.7%
2g18I00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.58 46.0 3.94e-01 83.9% 62.6%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.56 48.0 4.07e-01 91.3% 68.2%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.55 47.0 4.00e-01 91.3% 66.1%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 41.0 3.97e-01 77.2% 89.5%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.93e-01 76.5% 77.0%
3ty1A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 47.0 3.50e-01 99.3% 81.5%
7knlA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.52 33.0 3.66e-01 77.2% 81.6%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.51 37.0 3.52e-01 77.9% 63.3%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 38.0 3.07e-01 76.5% 85.5%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4583801 77.1.1.1 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.75 58.0 4.84e-01 94.0% 49.0%
2029638 71.2.1.2 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › EipB_like 0.74 53.0 4.42e-01 73.2% 62.8%
4411442 5084.10.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.68 59.0 3.92e-01 91.9% 48.0%
3407592 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.68 57.0 4.43e-01 90.6% 43.7%
3581297 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.66 55.0 4.75e-01 89.9% 60.0%
3664957 5084.5.1.57 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF28611 0.65 57.0 4.30e-01 92.6% 41.8%
3626881 5084.5.1.33 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel 0.64 58.0 4.56e-01 100.0% 48.5%
4681334 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.61 57.0 4.71e-01 100.0% 69.0%
3404731 5084.5.1.37 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.61 52.0 4.89e-01 91.3% 90.6%
3970343 5084.5.1.24 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp 0.59 50.0 4.44e-01 90.6% 75.8%
4873102 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.56 39.0 4.22e-01 71.8% 83.8%
1395707 5084.5.1.16 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BVU_2266-like 0.56 48.0 4.07e-01 91.3% 68.2%
4017051 9.13.1.4 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.55 40.0 4.11e-01 89.3% 77.9%
3843733 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.54 41.0 3.95e-01 77.2% 88.4%
4660347 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.54 39.0 3.07e-01 71.1% 94.4%
3897238 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.54 39.0 3.20e-01 73.8% 78.9%
4527793 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.53 39.0 3.88e-01 76.5% 77.2%
3824851 5084.5.1.43 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF30985 0.52 44.0 4.27e-01 89.9% 81.8%
4447762 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.51 37.0 3.69e-01 75.8% 76.1%
4172504 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.51 37.0 2.96e-01 75.2% 76.5%
4403418 12.3.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.51 38.0 3.04e-01 76.5% 84.4%
4258822 12.3.1.61 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF25837 0.50 35.0 3.12e-01 70.5% 66.8%