←Back to structures

hypothetical_protein_A3303_gp154

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp154__YP_009238659__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238659 ↗
Protein ID:
hypothetical_protein_A3303_gp154
Kingdom:
euk

Quality

71.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-67
PDB
Domain cluster: rep: hypothetical_protein_GMAR_ORF103__YP_009310220__Golden_Marseillevirus__1720526__D1-79
D2 high residues 74-134
PDB
D3 high residues 147-196
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.75 59.0 5.94e-01 100.0% 88.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.74 65.0 5.90e-01 100.0% 80.6%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.45e-01 100.0% 67.9%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.73 57.0 5.63e-01 100.0% 81.5%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 59.0 4.63e-01 94.0% 62.4%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 64.0 6.11e-01 100.0% 91.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.71 59.0 5.81e-01 100.0% 87.0%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.71 62.0 5.05e-01 100.0% 61.1%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.29e-01 100.0% 66.7%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.42e-01 90.0% 89.6%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.54e-01 100.0% 83.9%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 52.0 3.27e-01 92.0% 24.7%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.47e-01 100.0% 94.9%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.66 57.0 4.86e-01 100.0% 74.7%
2p5zX04 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.65 50.0 4.63e-01 86.0% 100.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 53.0 4.88e-01 100.0% 86.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 4.86e-01 100.0% 70.9%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.64 46.0 4.42e-01 88.0% 66.7%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 53.0 4.64e-01 100.0% 61.4%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 3.72e-01 90.0% 37.8%
3qexA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.63 46.0 3.03e-01 84.0% 90.5%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 49.0 3.76e-01 92.0% 73.0%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.60 44.0 4.13e-01 86.0% 61.2%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.60 51.0 3.02e-01 100.0% 34.6%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.60 50.0 4.85e-01 100.0% 96.6%
1g2bA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 46.0 4.36e-01 88.0% 80.6%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 47.0 3.81e-01 100.0% 62.2%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 46.0 2.84e-01 90.0% 30.8%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 46.0 2.94e-01 92.0% 54.4%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 49.0 4.23e-01 100.0% 75.9%
3nwsA01 2.40.50.800 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 44.0 3.35e-01 90.0% 76.6%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.57 43.0 3.57e-01 100.0% 45.6%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.54e-01 88.0% 50.0%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 47.0 3.38e-01 100.0% 43.3%
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.56 46.0 2.91e-01 100.0% 17.2%
3njcA00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.56 42.0 3.06e-01 84.0% 53.6%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.74e-01 100.0% 79.3%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 3.29e-01 96.0% 53.4%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 43.0 2.92e-01 92.0% 21.7%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 45.0 3.30e-01 100.0% 63.4%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.54 41.0 3.13e-01 90.0% 74.8%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 38.0 2.69e-01 78.0% 64.6%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.09e-01 90.0% 85.2%
1oh1A00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.53 41.0 3.32e-01 90.0% 64.2%
4qfwA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.53 40.0 2.63e-01 88.0% 59.3%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 41.0 2.70e-01 94.0% 37.7%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 37.0 2.91e-01 90.0% 71.1%
4a18O00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.50 40.0 3.13e-01 100.0% 61.9%
5tkwA01 3.30.420.380 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.50 36.0 2.69e-01 84.0% 75.9%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929508 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.82 66.0 4.88e-01 88.0% 64.8%
3232865 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 66.0 4.75e-01 90.0% 64.4%
4028093 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 65.0 4.84e-01 90.0% 68.0%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 65.0 6.33e-01 100.0% 81.8%
3934825 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 64.0 4.85e-01 88.0% 63.5%
3494172 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.79 63.0 4.40e-01 88.0% 58.1%
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.79 61.0 5.92e-01 100.0% 76.4%
3623874 2.1.1.51 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 0.79 64.0 4.65e-01 90.0% 63.7%
3715776 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 58.0 5.34e-01 100.0% 61.5%
5011984 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 62.0 4.71e-01 88.0% 67.5%
3505078 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 63.0 4.87e-01 88.0% 83.8%
3743614 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.77 68.0 6.46e-01 100.0% 83.3%
3708283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 68.0 5.69e-01 100.0% 82.4%
3701950 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.91e-01 100.0% 75.0%
4193599 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 5.33e-01 100.0% 59.0%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 66.0 5.86e-01 100.0% 78.7%
4009369 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 61.0 4.64e-01 90.0% 80.0%
3948255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 65.0 4.83e-01 100.0% 38.5%
3732571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 6.21e-01 100.0% 91.7%
3342814 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 65.0 5.27e-01 100.0% 75.8%
2321269 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.73 64.0 5.45e-01 100.0% 67.9%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 58.0 4.02e-01 86.0% 30.6%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 66.0 5.60e-01 100.0% 90.0%
3363448 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 63.0 5.28e-01 100.0% 70.6%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 61.0 5.30e-01 100.0% 88.7%
3376597 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.57e-01 82.0% 100.0%
1545879 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.70 60.0 4.78e-01 98.0% 100.0%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.08e-01 100.0% 84.7%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 60.0 5.54e-01 100.0% 84.6%
3506687 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.69 51.0 3.02e-01 84.0% 66.3%
3482559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 4.14e-01 100.0% 30.6%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.74e-01 100.0% 53.0%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 4.98e-01 100.0% 98.8%
3848399 4.8.1.24 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.68 58.0 5.24e-01 100.0% 80.0%
4655719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.67 58.0 4.85e-01 100.0% 70.0%
3369392 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.67 52.0 4.18e-01 86.0% 78.0%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.11e-01 100.0% 74.3%
3931715 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 51.0 4.27e-01 98.0% 96.0%
999030 3454.1.1.1 ↗ beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › PilP 0.63 47.0 3.80e-01 90.0% 40.8%
4029209 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 49.0 4.42e-01 88.0% 87.1%
3634374 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 45.0 4.56e-01 100.0% 82.0%
3938415 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.61 50.0 4.71e-01 100.0% 95.4%
4570706 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.61 47.0 2.81e-01 92.0% 50.2%
3424264 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.60 48.0 3.44e-01 92.0% 66.3%
3838874 219.1.1.8 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.59 52.0 3.58e-01 100.0% 41.1%
4048663 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 44.0 4.59e-01 100.0% 93.3%
4183857 325.1.7.30 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 0.58 44.0 3.98e-01 92.0% 58.7%
4052358 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 42.0 3.87e-01 84.0% 72.9%
3839768 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 40.0 2.42e-01 92.0% 11.1%
4072334 218.1.1.8 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.55 40.0 3.23e-01 86.0% 40.0%
4200618 2484.1.1.174 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.54 40.0 3.12e-01 82.0% 57.4%
4022776 880.1.1.1 ↗ a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind 0.53 43.0 2.50e-01 94.0% 22.5%
4822049 5084.3.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.52 38.0 3.79e-01 86.0% 88.9%
3960850 244.2.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.51 36.0 3.50e-01 82.0% 79.7%