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hypothetical_protein_A3303_gp168
Euk-VirBrazilian_marseillevirus
hypothetical_protein_A3303_gp168__YP_009238673__Brazilian_marseillevirus__1813599
Identity
- Accession:
- YP_009238673 ↗
- Protein ID:
- hypothetical_protein_A3303_gp168
- Kingdom:
- euk
Quality
76.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Brazilian_marseillevirus
TaxID: 1813599
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-68
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mk6A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.80 | 72.0 | 4.80e-01 | 100.0% | 36.2% |
| 2xmoA02 | 1.10.246.180 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.79 | 68.0 | 5.75e-01 | 98.0% | 89.5% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.77 | 62.0 | 4.85e-01 | 94.1% | 41.8% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.77 | 62.0 | 4.90e-01 | 90.2% | 43.4% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.75 | 53.0 | 4.77e-01 | 78.4% | 54.2% |
| 4ysxC00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.74 | 60.0 | 4.25e-01 | 90.2% | 33.3% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.73 | 65.0 | 5.93e-01 | 100.0% | 94.1% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.73 | 58.0 | 4.59e-01 | 90.2% | 41.7% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 57.0 | 5.67e-01 | 90.2% | 84.6% |
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.71 | 55.0 | 4.86e-01 | 90.2% | 57.7% |
| 3pr6A00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.71 | 53.0 | 3.91e-01 | 84.3% | 93.8% |
| 1jb0K00 | 1.20.860.20 | Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre | 0.67 | 50.0 | 5.18e-01 | 82.4% | 91.3% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 48.0 | 4.59e-01 | 82.4% | 65.6% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.66 | 50.0 | 3.50e-01 | 84.3% | 25.6% |
| 1vjxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 50.0 | 3.57e-01 | 82.4% | 32.9% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.65 | 50.0 | 4.26e-01 | 84.3% | 63.5% |
| 1j8yF01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.65 | 53.0 | 4.46e-01 | 90.2% | 67.4% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 49.0 | 3.55e-01 | 82.4% | 30.6% |
| 2oauA01 | 1.10.287.1260 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 48.0 | 3.93e-01 | 84.3% | 60.8% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.64 | 53.0 | 4.31e-01 | 98.0% | 83.0% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 47.0 | 4.35e-01 | 82.4% | 91.2% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 47.0 | 4.50e-01 | 82.4% | 96.7% |
| 4l6v600 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.62 | 52.0 | 4.03e-01 | 100.0% | 52.0% |
| 4b6xA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 47.0 | 4.28e-01 | 82.4% | 63.8% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.62 | 47.0 | 3.40e-01 | 88.2% | 26.3% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 47.0 | 3.79e-01 | 84.3% | 42.2% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 42.0 | 3.23e-01 | 70.6% | 57.9% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 46.0 | 4.58e-01 | 82.4% | 78.8% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.61 | 51.0 | 4.28e-01 | 96.1% | 56.0% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.61 | 42.0 | 3.85e-01 | 74.5% | 68.6% |
| 1jb0F00 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.60 | 49.0 | 3.75e-01 | 100.0% | 39.0% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 45.0 | 4.22e-01 | 82.4% | 71.0% |
| 2cwoA01 | 1.20.58.1200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain | 0.59 | 45.0 | 3.95e-01 | 82.4% | 63.5% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.59 | 45.0 | 4.05e-01 | 86.3% | 63.5% |
| 1rxqD00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.57 | 47.0 | 3.35e-01 | 94.1% | 33.7% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 42.0 | 3.59e-01 | 86.3% | 57.7% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 42.0 | 3.35e-01 | 82.4% | 40.2% |
| 5k2xA00 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 46.0 | 2.76e-01 | 94.1% | 82.9% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.55 | 47.0 | 2.78e-01 | 100.0% | 68.4% |
| 1ikpA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.55 | 47.0 | 3.39e-01 | 100.0% | 39.9% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4964111 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.90 | 80.0 | 6.16e-01 | 96.1% | 70.5% |
| 3649730 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.87 | 73.0 | 5.97e-01 | 92.2% | 52.2% |
| 4986197 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.84 | 70.0 | 5.79e-01 | 92.2% | 74.4% |
| 3172204 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.83 | 70.0 | 5.10e-01 | 92.2% | 84.6% |
| 3943353 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.82 | 67.0 | 5.59e-01 | 92.2% | 55.6% |
| 1174795 | 3650.1.1.1 ↗ | alpha arrays › C-terminal domain of Lmo2642 protein › C-terminal domain of Lmo2642 protein › C-terminal domain of Lmo2642 protein › CNP_C_terminal | 0.81 | 71.0 | 5.45e-01 | 98.0% | 64.6% |
| 3741742 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.80 | 65.0 | 4.07e-01 | 90.2% | 18.1% |
| 3926367 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.79 | 65.0 | 3.98e-01 | 90.2% | 15.9% |
| 3516948 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.79 | 65.0 | 4.03e-01 | 90.2% | 18.2% |
| 3709704 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.79 | 64.0 | 3.99e-01 | 90.2% | 17.1% |
| 3304227 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.79 | 68.0 | 5.90e-01 | 98.0% | 86.3% |
| 3185674 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.79 | 64.0 | 3.89e-01 | 90.2% | 15.2% |
| 3430911 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.79 | 65.0 | 5.58e-01 | 92.2% | 73.8% |
| 3176131 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.79 | 69.0 | 5.47e-01 | 100.0% | 64.8% |
| 3507767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.79 | 66.0 | 5.37e-01 | 94.1% | 78.9% |
| 5066085 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.78 | 67.0 | 5.46e-01 | 96.1% | 73.7% |
| 5005349 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 63.0 | 3.62e-01 | 90.2% | 12.8% |
| 3398929 | 5041.1.1.32 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 | 0.77 | 62.0 | 5.19e-01 | 90.2% | 52.2% |
| 3735463 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 67.0 | 5.52e-01 | 98.0% | 96.7% |
| 3423711 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.74 | 65.0 | 5.06e-01 | 100.0% | 76.4% |
| 3278820 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.73 | 62.0 | 4.78e-01 | 98.0% | 55.8% |
| 3930750 | 142.1.1.36 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › C_tripleX | 0.72 | 63.0 | 5.57e-01 | 100.0% | 84.0% |
| 3261624 | 3470.1.1.0 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain | 0.72 | 57.0 | 5.79e-01 | 90.2% | 100.0% |
| 4031352 | 6026.1.1.43 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › DUF1024 | 0.72 | 57.0 | 4.89e-01 | 90.2% | 56.0% |
| 3471523 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.72 | 58.0 | 3.71e-01 | 96.1% | 18.5% |
| 4023307 | 183.1.1.0 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain | 0.71 | 61.0 | 5.38e-01 | 100.0% | 66.7% |
| 2845631 | 5019.1.1.1 ↗ | extended segments › Subunit III of photosystem I reaction centre, PsaF › Subunit III of photosystem I reaction centre, PsaF › Subunit III of photosystem I reaction centre, PsaF › PSI_PsaF | 0.71 | 62.0 | 4.40e-01 | 100.0% | 33.8% |
| 3665480 | 109.4.1.1559 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tic110 | 0.70 | 52.0 | 3.26e-01 | 82.4% | 15.0% |
| 3285228 | 191.1.1.55 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_15 | 0.70 | 61.0 | 4.44e-01 | 98.0% | 45.2% |
| 3963355 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.69 | 48.0 | 4.25e-01 | 74.5% | 50.7% |
| 3995509 | 3730.1.1.0 ↗ | alpha arrays › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain › CCM3/GCKIII dimerization domain | 0.69 | 57.0 | 5.34e-01 | 94.1% | 88.9% |
| 3961309 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.69 | 57.0 | 4.38e-01 | 98.0% | 51.2% |
| 3814488 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 58.0 | 4.63e-01 | 100.0% | 80.9% |
| 4033046 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.68 | 54.0 | 4.88e-01 | 92.2% | 92.0% |
| 3287765 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.68 | 61.0 | 4.53e-01 | 100.0% | 52.0% |
| 3309541 | 5063.1.1.17 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Gly-zipper_YMGG | 0.68 | 56.0 | 5.37e-01 | 94.1% | 80.0% |
| 3570117 | 375.6.1.2 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 | 0.68 | 50.0 | 4.83e-01 | 82.4% | 73.3% |
| 3251476 | 3470.1.1.0 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain | 0.67 | 52.0 | 4.66e-01 | 86.3% | 63.0% |
| 3619500 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.67 | 50.0 | 3.08e-01 | 82.4% | 14.0% |
| 3816176 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.66 | 54.0 | 4.37e-01 | 94.1% | 69.5% |
| 4031203 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.64 | 54.0 | 4.72e-01 | 98.0% | 87.5% |
| 3175548 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.63 | 53.0 | 3.72e-01 | 98.0% | 38.9% |
| 4033037 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.62 | 52.0 | 4.74e-01 | 96.1% | 98.6% |
| 3216492 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.61 | 47.0 | 3.69e-01 | 84.3% | 43.8% |
| 3230315 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.60 | 50.0 | 3.94e-01 | 92.2% | 66.7% |
| 1144416 | 5019.1.1.1 ↗ | extended segments › Subunit III of photosystem I reaction centre, PsaF › Subunit III of photosystem I reaction centre, PsaF › Subunit III of photosystem I reaction centre, PsaF › PSI_PsaF | 0.60 | 49.0 | 4.18e-01 | 100.0% | 59.1% |
| 4990523 | 129.1.1.15 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer | 0.58 | 44.0 | 3.78e-01 | 90.2% | 100.0% |