←Back to structures

hypothetical_protein_A3303_gp212

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp212__YP_009238717__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238717 ↗
Protein ID:
hypothetical_protein_A3303_gp212
Kingdom:
euk

Quality

76.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-141
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp385__YP_009507147__Tunisvirus_fontaine2__1421067__D44-122
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ek7A01 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.67 57.0 4.19e-01 91.8% 83.4%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.65 45.0 4.30e-01 72.2% 85.3%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.65 46.0 3.25e-01 73.2% 68.0%
7knlA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.62 48.0 4.54e-01 81.4% 80.7%
1d6uA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.61 51.0 3.39e-01 91.8% 73.9%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 43.0 3.83e-01 91.8% 49.3%
1ugiD00 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.61 41.0 4.41e-01 77.3% 81.7%
5cxoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 44.0 3.96e-01 77.3% 96.3%
1pu4A03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 50.0 3.31e-01 91.8% 73.2%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 43.0 3.82e-01 77.3% 93.9%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 43.0 3.81e-01 79.4% 94.3%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.57 49.0 3.80e-01 93.8% 50.0%
3gm8A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 30.0 3.34e-01 82.5% 62.8%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.60e-01 72.2% 97.7%
3icyA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 34.0 3.24e-01 71.1% 50.0%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.04e-01 100.0% 74.7%
3ua3A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.52 42.0 3.37e-01 88.7% 98.0%
8fkmA01 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 45.0 3.79e-01 94.8% 97.0%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 45.0 3.22e-01 100.0% 46.0%
1ut7B01 2.170.150.80 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › NAC domain 0.52 36.0 3.36e-01 85.6% 56.0%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.36e-01 91.8% 48.2%
8t5tA01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 43.0 3.45e-01 90.7% 86.5%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.35e-01 77.3% 97.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3499122 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.69 57.0 4.33e-01 100.0% 38.2%
4959370 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.67 52.0 4.35e-01 92.8% 47.6%
3514713 11.1.1.41 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.67 46.0 3.93e-01 71.1% 87.1%
4466226 5087.1.1.1 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.66 51.0 5.00e-01 91.8% 76.2%
4373611 4237.1.1.1 ↗ beta barrels › FomD-like › FomD-like › FomD-like › DUF402 0.65 60.0 4.83e-01 97.9% 65.7%
3793430 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.65 42.0 4.27e-01 91.8% 66.3%
3281242 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.64 50.0 4.51e-01 82.5% 100.0%
3597404 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.63 54.0 4.14e-01 100.0% 40.9%
3649104 844.1.1.5 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 0.62 54.0 4.08e-01 99.0% 57.6%
3488509 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.61 53.0 4.26e-01 92.8% 92.8%
3925441 5087.2.1.0 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N 0.58 47.0 3.45e-01 87.6% 36.2%
3489236 243.1.1.12 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.58 42.0 4.14e-01 87.6% 70.5%
3920826 844.1.1.4 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Scramblase 0.57 45.0 3.84e-01 99.0% 50.0%
3559952 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.57 50.0 3.74e-01 96.9% 43.3%
4939324 5.1.4.559 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_propel 0.56 49.0 3.44e-01 99.0% 50.6%
4964191 71.1.1.0 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.56 44.0 3.46e-01 84.5% 92.9%
151337 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.55 38.0 2.52e-01 72.2% 40.6%
3397367 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.55 46.0 3.87e-01 91.8% 86.7%
4950139 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.54 38.0 3.60e-01 76.3% 100.0%
3699700 5.1.4.263 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_2nd 0.53 46.0 2.75e-01 97.9% 23.1%
4608992 243.1.1.1 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.52 40.0 3.47e-01 84.5% 94.3%
3229482 71.1.1.19 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.51 46.0 3.54e-01 95.9% 88.8%
3423528 708.1.1.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › NAM 0.51 37.0 3.16e-01 90.7% 44.8%
3608162 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.51 43.0 3.60e-01 91.8% 87.3%