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hypothetical_protein_A3303_gp215

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp215__YP_009238720__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238720 ↗
Protein ID:
hypothetical_protein_A3303_gp215
Kingdom:
euk

Quality

71.7 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-58
PDB
D2 medium residues 59-108
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgxA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 49.0 4.30e-01 82.0% 50.7%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 4.32e-01 72.0% 52.9%
3v53E00 1.20.1390.10 Mainly Alpha › Up-down Bundle › PWI domain › PWI domain 0.68 47.0 3.79e-01 76.0% 36.3%
3ejnA03 1.20.120.840 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SusD-like, tetratrico peptide repeats domain 0.64 53.0 4.08e-01 92.0% 43.2%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 43.0 3.94e-01 72.0% 54.4%
6tmfT00 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.62 45.0 4.25e-01 80.0% 62.5%
3qkaE02 1.10.287.2460 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 46.0 4.76e-01 90.0% 100.0%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 3.58e-01 70.0% 47.8%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 53.0 4.62e-01 100.0% 90.8%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.60 51.0 3.36e-01 96.0% 84.0%
1dmhA00 2.60.130.10 Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase 0.57 43.0 2.72e-01 88.0% 14.2%
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 43.0 4.09e-01 98.0% 74.2%
1obbA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.54 45.0 2.65e-01 100.0% 10.5%
2lrmA00 1.10.890.30 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein 0.54 40.0 3.45e-01 82.0% 73.8%
2vyrA00 1.10.245.10 Mainly Alpha › Orthogonal Bundle › MDM2 › SWIB/MDM2 domain 0.53 39.0 3.29e-01 80.0% 47.1%
2kxpA01 3.30.1140.60 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit 0.52 38.0 3.21e-01 88.0% 45.8%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3365477 397.3.1.0 ↗ few secondary structure elements › Toxic hairpin › Pollen allergen ole e 6 › Pollen allergen ole e 6 0.83 54.0 6.03e-01 74.0% 89.5%
3406014 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 4.92e-01 74.0% 55.4%
4161707 1023.1.1.1 ↗ beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N 0.75 64.0 5.16e-01 92.0% 90.0%
3807764 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.74 55.0 4.80e-01 80.0% 56.0%
3791793 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.71 49.0 4.19e-01 78.0% 43.5%
3036753 397.7.1.0 ↗ few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 0.71 52.0 5.12e-01 90.0% 73.2%
3476412 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.69 58.0 5.43e-01 100.0% 83.1%
2622460 3396.1.1.1 ↗ extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG_1_N 0.66 51.0 4.75e-01 100.0% 65.7%
4030342 109.4.1.109 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.65 51.0 2.90e-01 90.0% 30.8%
3211598 864.1.1.1 ↗ a+b two layers › DLC › DLC › DLC › Dynein_light 0.65 54.0 4.48e-01 100.0% 53.5%
3620979 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 44.0 4.29e-01 90.0% 67.3%
3907867 3939.1.1.156 ↗ alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › PF27558 0.62 53.0 3.85e-01 100.0% 37.2%
3575793 632.8.1.2 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › Alpha-2-MRAP_C 0.61 46.0 3.80e-01 100.0% 41.8%
3270380 5059.1.1.17 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TMEM234 0.60 49.0 3.78e-01 96.0% 38.3%
3610424 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.54 42.0 3.63e-01 96.0% 53.8%
5010964 101.1.2.143 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.51 43.0 3.56e-01 100.0% 75.0%
3749862 605.1.1.178 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM215 0.50 44.0 4.17e-01 100.0% 86.7%