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hypothetical_protein_A3303_gp229

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp229__YP_009238734__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238734 ↗
Protein ID:
hypothetical_protein_A3303_gp229
Kingdom:
euk

Quality

87.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

View cluster (94 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 28-144
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bumX00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 63.0 4.64e-01 98.3% 44.9%
2vckA00 3.40.1500.20 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › 0.67 56.0 4.53e-01 88.0% 74.0%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.66 60.0 4.69e-01 97.4% 69.5%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.59 53.0 4.17e-01 100.0% 66.5%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.58 48.0 4.58e-01 90.6% 87.8%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.56 48.0 3.53e-01 92.3% 93.4%
3ty1A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 48.0 3.37e-01 99.1% 95.3%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.53 38.0 3.86e-01 76.1% 81.7%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.52 41.0 4.01e-01 84.6% 89.3%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.68e-01 81.2% 68.0%
1rwhA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 42.0 3.26e-01 88.0% 96.7%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.51 43.0 3.71e-01 93.2% 59.3%
3vsmA02 2.70.98.100 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Baculovirus E66 occlusion-derived virus envelope protein, domain 2 0.51 40.0 3.42e-01 82.9% 78.1%
3blcA00 2.70.98.90 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 38.0 2.94e-01 79.5% 96.4%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 43.0 3.10e-01 96.6% 64.0%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 42.0 3.16e-01 90.6% 97.4%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3591979 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.74 60.0 5.47e-01 94.9% 65.8%
3574877 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.73 69.0 4.93e-01 100.0% 42.9%
3252530 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.73 67.0 4.85e-01 99.1% 49.4%
4027343 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.72 64.0 5.86e-01 100.0% 74.0%
3591198 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.72 58.0 6.13e-01 95.7% 96.2%
3405792 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.72 57.0 6.09e-01 94.9% 98.0%
3772693 77.3.1.3 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.71 66.0 5.39e-01 100.0% 56.7%
4024499 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.71 63.0 5.75e-01 100.0% 74.0%
4027722 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.71 58.0 5.68e-01 95.7% 81.6%
3489191 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.71 65.0 4.81e-01 99.1% 49.0%
3598356 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.71 58.0 6.14e-01 95.7% 97.1%
3531694 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.71 65.0 4.97e-01 100.0% 47.7%
4188109 5084.5.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 0.71 64.0 4.59e-01 97.4% 46.9%
3604875 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.70 64.0 5.16e-01 100.0% 52.7%
3711519 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.70 64.0 5.64e-01 100.0% 68.8%
3920359 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.69 61.0 5.85e-01 96.6% 86.7%
3597404 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.69 63.0 4.98e-01 100.0% 51.1%
3598917 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.68 63.0 6.10e-01 100.0% 95.4%
3712316 77.3.1.3 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.68 63.0 4.81e-01 100.0% 53.5%
3706026 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.68 62.0 5.14e-01 100.0% 61.0%
3909372 5087.1.1.1 ↗ beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.68 62.0 5.04e-01 97.4% 78.0%
3707357 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.68 62.0 4.97e-01 100.0% 58.2%
3601683 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.67 61.0 4.49e-01 100.0% 44.0%
3616220 77.3.1.3 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN 0.67 61.0 5.50e-01 100.0% 86.3%
3932438 5084.5.1.33 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel 0.66 58.0 4.49e-01 94.9% 47.5%
3718163 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.66 61.0 5.59e-01 100.0% 78.0%
3716364 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.66 60.0 4.36e-01 100.0% 43.7%
3406570 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.66 52.0 5.51e-01 95.7% 94.3%
3388896 79.1.1.27 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › MORN 0.66 60.0 5.50e-01 100.0% 77.3%
3254045 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.65 60.0 4.46e-01 100.0% 84.9%
3705162 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.65 59.0 4.33e-01 99.1% 41.6%
3890447 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.65 55.0 5.72e-01 95.7% 98.2%
3399621 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.64 58.0 4.27e-01 98.3% 42.7%
3255116 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.64 58.0 4.16e-01 100.0% 44.2%
3807906 331.3.1.43 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C 0.63 45.0 3.64e-01 72.6% 52.1%
3827592 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.63 56.0 5.05e-01 96.6% 79.1%
None — 0.61 56.0 3.98e-01 100.0% 60.8%
3598916 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.59 53.0 4.61e-01 100.0% 73.9%
3474675 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.58 52.0 3.77e-01 100.0% 41.8%
1933307 9.13.1.5 ↗ beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.55 44.0 4.40e-01 85.5% 92.7%
3199793 5.1.5.179 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Clathrin-link 0.53 47.0 3.42e-01 99.1% 49.6%
4568601 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.53 39.0 2.95e-01 76.9% 65.0%
3809562 883.1.1.20 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › SMP_MUG190-like 0.53 45.0 3.71e-01 90.6% 100.0%
4302710 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.52 39.0 3.02e-01 76.9% 72.7%
5040016 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 37.0 3.44e-01 91.5% 55.5%
2016 12.3.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Lyase_8 0.52 42.0 3.26e-01 88.0% 96.3%
4942549 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 43.0 3.27e-01 94.9% 46.8%
4620494 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.51 38.0 2.88e-01 77.8% 67.0%
D2 medium residues 145-217
PDB
Domain cluster: rep: hypothetical_protein_GMAR_ORF112__YP_009310229__Golden_Marseillevirus__1720526__D150-214
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5towB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 34.0 2.59e-01 94.5% 20.6%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 35.0 3.82e-01 89.0% 73.2%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 43.0 4.13e-01 82.2% 85.6%
2dt8A02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.55 41.0 3.44e-01 82.2% 45.4%
4mtsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 41.0 3.45e-01 90.4% 75.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943036 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.54 45.0 3.59e-01 95.9% 64.4%
3720741 213.1.1.11 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT 0.54 39.0 3.07e-01 80.8% 53.9%
3782750 60.1.2.1 ↗ beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku 0.52 41.0 2.67e-01 90.4% 55.5%
4980873 7510.1.1.0 ↗ a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.50 35.0 2.36e-01 74.0% 63.3%