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hypothetical_protein_A3303_gp242

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp242__YP_009238747__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238747 ↗
Protein ID:
hypothetical_protein_A3303_gp242
Kingdom:
euk

Quality

73.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

View cluster (37 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 126-310
PDB
Domain cluster: rep: hypothetical_protein_F8204_gp086__YP_009702079__Heliothis_virescens_ascovirus_3g__1246651__D76-202_214-282
D2 medium residues 48-125
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 37.0 4.37e-01 85.9% 82.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 38.0 4.45e-01 84.6% 82.7%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.64 41.0 3.31e-01 78.2% 33.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 37.0 4.26e-01 85.9% 82.1%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 36.0 4.29e-01 87.2% 88.0%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.61 46.0 3.92e-01 80.8% 81.4%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 39.0 4.18e-01 85.9% 76.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 35.0 3.62e-01 74.4% 60.3%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.60 41.0 4.19e-01 70.5% 96.0%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 36.0 4.12e-01 91.0% 100.0%
5cw7B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.58 35.0 3.38e-01 92.3% 51.1%
2rl8A00 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.57 49.0 4.03e-01 97.4% 91.9%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 41.0 2.97e-01 78.2% 27.2%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 41.0 2.96e-01 80.8% 28.1%
2ov9C01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 42.0 3.51e-01 85.9% 90.5%
2mouA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 45.0 3.40e-01 98.7% 97.3%
6fopA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.54 44.0 3.26e-01 93.6% 86.7%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.53 40.0 2.51e-01 80.8% 33.7%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 36.0 3.31e-01 73.1% 53.5%
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 40.0 3.91e-01 83.3% 91.0%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.52 38.0 3.32e-01 78.2% 54.4%
1sbkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 40.0 3.41e-01 84.6% 52.6%
6l6jA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 39.0 3.33e-01 82.1% 89.0%
2ffsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 37.0 3.05e-01 74.4% 77.9%
3k30A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 40.0 3.40e-01 84.6% 91.7%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.28e-01 92.3% 94.0%
3d5pA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.51 44.0 3.75e-01 97.4% 72.2%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.50 35.0 3.17e-01 75.6% 52.3%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4044896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 38.0 3.87e-01 85.9% 58.7%
3727615 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.65 44.0 4.18e-01 82.1% 57.9%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 37.0 3.97e-01 82.1% 69.2%
4573193 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.62 39.0 2.57e-01 87.2% 14.6%
4023922 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.61 40.0 3.33e-01 75.6% 37.9%
5060347 101.8.1.4 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f 0.59 38.0 2.33e-01 94.9% 10.0%
3428544 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.59 40.0 3.49e-01 78.2% 45.0%
3326294 708.1.1.7 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.58 38.0 3.66e-01 79.5% 57.8%
5027871 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.57 38.0 3.64e-01 97.4% 57.0%
3418861 708.1.1.7 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut 0.57 38.0 3.58e-01 78.2% 56.8%
3791563 5.1.2.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF7911 0.56 49.0 3.36e-01 100.0% 58.7%
3605378 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.56 41.0 3.65e-01 76.9% 91.8%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 35.0 3.72e-01 74.4% 71.4%
3198655 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.56 34.0 3.72e-01 79.5% 73.8%
3930366 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 37.0 4.05e-01 85.9% 88.3%
3578918 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.55 40.0 3.38e-01 78.2% 45.9%
3926131 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.55 40.0 2.86e-01 78.2% 37.0%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 39.0 3.97e-01 85.9% 77.3%
4496856 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.55 41.0 2.66e-01 80.8% 17.9%
3920188 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.54 41.0 2.93e-01 80.8% 27.7%
4983418 3016.1.1.1 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.52 39.0 3.66e-01 79.5% 72.6%
3288503 873.1.1.7 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › Arabinose_bd 0.52 36.0 2.74e-01 71.8% 54.5%
4947695 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 3.76e-01 76.9% 77.3%
5073593 243.6.1.0 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.52 38.0 3.87e-01 83.3% 81.3%
5018743 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.52 36.0 3.69e-01 79.5% 76.0%
3302391 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.52 45.0 3.78e-01 100.0% 80.7%
3856800 102.1.3.1 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain › PAP_assoc 0.52 43.0 3.21e-01 100.0% 97.9%
168394 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.51 44.0 3.75e-01 97.4% 72.2%
5008645 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.51 35.0 3.62e-01 78.2% 74.7%
3473407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.75e-01 75.6% 78.7%
3420926 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 44.0 2.89e-01 100.0% 24.7%
5057974 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 30.0 2.70e-01 92.3% 40.0%
3538408 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 28.0 2.66e-01 83.3% 42.1%
D3 medium residues 315-438
PDB