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hypothetical_protein_A3303_gp258

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp258__YP_009238763__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238763 ↗
Protein ID:
hypothetical_protein_A3303_gp258
Kingdom:
euk

Quality

70.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 299-419
PDB
Domain cluster: rep: hypothetical_protein_MIV061R__YP_654633__Invertebrate_iridescent_virus_3__345201__D274-385
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4akgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.56 41.0 3.81e-01 77.7% 63.5%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 33.0 3.38e-01 85.1% 60.0%
3hutA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 40.0 3.49e-01 77.7% 86.7%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.53 37.0 3.41e-01 71.1% 98.7%
1r0dA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.52 39.0 3.37e-01 79.3% 65.3%
6z4xA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 41.0 3.75e-01 83.5% 72.9%
1ow4A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.52 34.0 3.45e-01 100.0% 65.8%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 38.0 3.74e-01 76.9% 91.5%
1h6gA01 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 35.0 3.62e-01 71.9% 90.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4162677 1198.1.1.0 ↗ alpha bundles › BTA121 › BTA121 › BTA121 0.73 54.0 5.66e-01 76.9% 93.6%
4017953 109.3.1.179 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7708 0.60 52.0 4.44e-01 98.3% 73.7%
3704822 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 39.0 3.56e-01 77.7% 51.5%
4390762 628.1.1.1 ↗ alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD 0.56 40.0 4.09e-01 79.3% 75.0%
3245018 109.4.1.543 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › efThoc1 0.55 33.0 2.68e-01 97.5% 33.0%
3871867 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.54 42.0 4.04e-01 81.8% 90.0%
3656077 6108.1.1.1 ↗ alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Dynamin_M,GED 0.52 36.0 2.61e-01 70.2% 47.3%
3930444 601.1.2.2 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › I_LWEQ 0.52 39.0 3.12e-01 80.2% 95.6%
3514956 601.1.2.2 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › I_LWEQ 0.51 40.0 3.40e-01 81.8% 64.6%
D2 high residues 431-509
PDB
Domain cluster: rep: hypothetical_protein_B1750_gp257__YP_009345402__Noumeavirus__1955558__D432-516
D3 medium residues 164-287
PDB