←Back to structures
hypothetical_protein_A3303_gp316
Euk-VirBrazilian_marseillevirus
hypothetical_protein_A3303_gp316__YP_009238821__Brazilian_marseillevirus__1813599
Identity
- Accession:
- YP_009238821 ↗
- Protein ID:
- hypothetical_protein_A3303_gp316
- Kingdom:
- euk
Quality
76.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Brazilian_marseillevirus
TaxID: 1813599
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-94
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qjvA03 | 3.30.70.3110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 31.0 | 3.58e-01 | 86.5% | 74.2% |
| 7d88A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 40.0 | 2.76e-01 | 86.5% | 79.5% |
| 4ap5A02 | 3.40.50.11350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 41.0 | 3.45e-01 | 92.1% | 92.4% |
| 2pn5A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.50 | 34.0 | 3.32e-01 | 93.3% | 63.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410774 | 382.1.1.14 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › DUF753 | 0.59 | 36.0 | 3.74e-01 | 84.3% | 64.7% |
| 3671314 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.55 | 39.0 | 2.84e-01 | 74.2% | 33.5% |
| 3732943 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.55 | 47.0 | 3.26e-01 | 100.0% | 48.6% |
| 3690519 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.55 | 47.0 | 3.10e-01 | 100.0% | 44.7% |
| 3608664 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.54 | 40.0 | 2.95e-01 | 79.8% | 83.2% |
| 4213492 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.54 | 47.0 | 3.17e-01 | 100.0% | 51.7% |
| 3819968 | 304.24.1.20 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › ABCA12_C | 0.52 | 37.0 | 3.68e-01 | 74.2% | 84.0% |