Back to structures

hypothetical_protein_A3303_gp345

Euk-Vir

Brazilian_marseillevirus

hypothetical_protein_A3303_gp345__YP_009238850__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238850 ↗
Protein ID:
hypothetical_protein_A3303_gp345
Kingdom:
euk

Quality

69.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-55
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.91 72.0 7.03e-01 100.0% 77.2%
1a7jA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 70.0 4.31e-01 100.0% 25.8%
3dgpA00 3.30.70.2610 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 57.0 5.42e-01 90.4% 85.5%
2i8eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 57.0 5.10e-01 90.4% 71.6%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.70 60.0 4.51e-01 100.0% 84.3%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.68 53.0 4.91e-01 88.5% 81.2%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.67 57.0 4.31e-01 100.0% 51.1%
1uu1B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 55.0 4.28e-01 100.0% 45.0%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.67 56.0 4.54e-01 100.0% 70.4%
6k2eA01 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 53.0 4.89e-01 90.4% 75.0%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.66 52.0 3.88e-01 90.4% 38.6%
1jg5A00 3.30.1410.10 Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP 0.66 56.0 4.90e-01 100.0% 68.7%
3dgpB00 3.30.70.1220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like 0.65 51.0 4.86e-01 90.4% 79.4%
3ui3A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 51.0 4.25e-01 90.4% 65.3%
1zpwX00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 4.44e-01 90.4% 62.2%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.64 53.0 4.80e-01 100.0% 79.7%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 51.0 4.29e-01 90.4% 63.4%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.64 50.0 4.51e-01 90.4% 74.0%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.64 51.0 4.73e-01 92.3% 72.5%
1k78B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 3.69e-01 78.8% 39.2%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 50.0 4.12e-01 90.4% 59.2%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.63 49.0 4.53e-01 90.4% 75.3%
3v8vA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.63 50.0 3.36e-01 90.4% 81.6%
1s7hA02 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 48.0 4.31e-01 90.4% 72.0%
1hi9A02 3.30.1360.130 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein 0.62 51.0 4.63e-01 100.0% 82.9%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.62 52.0 4.15e-01 98.1% 65.8%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 44.0 4.03e-01 80.8% 64.0%
2gqfA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 50.0 3.32e-01 100.0% 41.4%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 4.09e-01 90.4% 69.7%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.61 51.0 4.29e-01 100.0% 92.7%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.61 43.0 3.76e-01 78.8% 75.9%
4emyA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.61 51.0 3.64e-01 100.0% 35.3%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.60 49.0 4.01e-01 100.0% 61.9%
4i0wA00 3.30.70.2980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 51.0 4.34e-01 100.0% 78.3%
4efjA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.59 48.0 3.71e-01 100.0% 51.4%
2yxlA03 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.59 44.0 4.36e-01 88.5% 89.7%
1yqhA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 45.0 3.76e-01 90.4% 57.7%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 44.0 4.11e-01 88.5% 80.0%
2gqcA01 3.30.70.2080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 43.0 4.24e-01 86.5% 94.6%
2pq0A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.58 41.0 3.40e-01 76.9% 80.0%
3if4A01 2.20.20.40 Mainly Beta › Single Sheet › Anthopleurin-A › Integron cassette protein 0.58 44.0 4.51e-01 82.7% 88.0%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 3.49e-01 94.2% 43.8%
4qmfD02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.57 44.0 3.79e-01 90.4% 78.3%
3ezjA03 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 44.0 4.37e-01 90.4% 96.4%
4o4bB00 3.30.470.160 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase 0.57 46.0 3.11e-01 100.0% 82.0%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.56 41.0 3.98e-01 88.5% 79.1%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.56 41.0 3.42e-01 82.7% 80.2%
2a5yC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 3.75e-01 100.0% 56.8%
3rq1D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 3.43e-01 100.0% 34.6%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 3.91e-01 100.0% 76.4%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 3.90e-01 88.5% 76.7%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.43e-01 100.0% 47.8%
3euhC02 1.10.10.2260 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain 0.54 43.0 3.57e-01 96.2% 84.3%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.69e-01 88.5% 75.9%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.56e-01 80.8% 78.3%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.76e-01 100.0% 74.4%
2jtvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 4.01e-01 94.2% 81.5%
1rv9A00 3.60.140.10 Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases 0.52 36.0 2.53e-01 80.8% 99.2%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.68e-01 88.5% 82.2%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.52 39.0 3.02e-01 94.2% 73.9%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.23e-01 100.0% 43.3%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.48e-01 86.5% 73.8%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.55e-01 80.8% 80.6%
3rq4A02 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.51 40.0 3.14e-01 98.1% 77.5%
3cuqC01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.51 35.0 3.02e-01 76.9% 59.2%
2doaA00 1.10.10.2670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › E3 ubiquitin-protein ligase 0.50 41.0 3.43e-01 100.0% 57.7%
1e1hB01 1.20.58.540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 33.0 2.82e-01 71.2% 46.6%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3936152 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.82 73.0 6.21e-01 100.0% 64.7%
3470093 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.81 73.0 6.76e-01 100.0% 83.1%
4526098 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.81 73.0 6.26e-01 100.0% 67.5%
3229861 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.80 71.0 6.45e-01 100.0% 78.6%
3998582 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.80 72.0 6.50e-01 100.0% 78.6%
4997049 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.79 67.0 6.12e-01 100.0% 71.4%
3409500 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.78 70.0 6.32e-01 100.0% 78.6%
3953655 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.78 69.0 6.41e-01 100.0% 87.7%
3259873 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.78 70.0 6.15e-01 100.0% 78.7%
5081376 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.77 67.0 6.13e-01 100.0% 84.3%
3701635 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.77 66.0 5.50e-01 100.0% 65.3%
3620127 3696.1.1.1 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › HARP 0.76 65.0 5.72e-01 100.0% 68.8%
4028694 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.75 66.0 6.19e-01 100.0% 87.7%
5052581 242.2.1.2 a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N 0.73 63.0 5.41e-01 100.0% 64.7%
5010613 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.72 63.0 5.91e-01 100.0% 83.1%
3386110 306.3.1.0 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.70 61.0 5.11e-01 100.0% 67.8%
4982880 242.4.1.0 a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain 0.69 60.0 4.21e-01 100.0% 30.6%
3283649 3696.1.1.0 a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.69 59.0 5.12e-01 100.0% 65.9%
3590336 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.68 56.0 4.03e-01 100.0% 40.0%
3397043 306.5.1.0 a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP 0.68 58.0 5.10e-01 100.0% 70.0%
4174817 327.16.1.17 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF27474 0.67 53.0 5.40e-01 90.4% 93.9%
4956112 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.66 56.0 4.89e-01 100.0% 72.9%
1394838 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.66 52.0 3.88e-01 90.4% 38.6%
4467547 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.66 56.0 5.27e-01 100.0% 86.2%
4325343 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.66 56.0 4.87e-01 100.0% 64.7%
1114523 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.66 54.0 4.75e-01 100.0% 67.4%
4990495 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.65 55.0 5.21e-01 100.0% 83.1%
5071804 242.4.1.2 a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.65 56.0 4.76e-01 100.0% 60.0%
3987502 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.65 54.0 3.85e-01 100.0% 40.0%
4033471 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.65 51.0 4.26e-01 90.4% 63.2%
4227966 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.65 53.0 5.08e-01 100.0% 86.2%
5048601 306.3.1.1 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.64 53.0 4.47e-01 100.0% 64.6%
5000489 5104.1.1.0 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases 0.64 53.0 4.26e-01 100.0% 51.3%
4576277 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.64 50.0 4.65e-01 92.3% 71.4%
5040129 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.63 48.0 4.09e-01 88.5% 58.9%
4955639 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.63 52.0 4.94e-01 100.0% 92.3%
4977215 304.117.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC 0.62 47.0 4.56e-01 86.5% 83.3%
4951928 101.1.9.75 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF61 0.62 51.0 4.92e-01 100.0% 87.3%
3478140 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.62 34.0 3.54e-01 88.5% 52.0%
3577927 109.4.1.43 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP 0.62 48.0 3.03e-01 86.5% 21.7%
3602755 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 48.0 4.33e-01 88.5% 66.7%
3983963 101.1.9.41 alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N 0.61 48.0 4.00e-01 94.2% 81.9%
3902398 70.3.1.0 beta barrels › beta-clip › SET domain-like › SET domain-like 0.61 42.0 3.32e-01 73.1% 33.0%
4945852 2003.1.5.443 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PUA 0.61 48.0 3.00e-01 92.3% 15.8%
3206671 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.60 48.0 3.74e-01 94.2% 56.2%
3911303 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.60 46.0 4.59e-01 88.5% 94.5%
3190289 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.60 45.0 2.97e-01 82.7% 73.8%
4170754 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.60 47.0 4.54e-01 90.4% 80.0%
4215974 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.59 46.0 4.34e-01 92.3% 75.7%
4944909 7577.1.1.3 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_5 0.59 46.0 2.91e-01 96.2% 17.7%
5006819 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.59 47.0 3.97e-01 94.2% 61.1%
5031515 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.58 47.0 3.94e-01 94.2% 66.3%
3946500 306.1.1.1 a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB › PTS_EIIB 0.58 50.0 4.38e-01 100.0% 73.8%
3731261 101.1.2.520 alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.58 48.0 4.10e-01 100.0% 77.9%
4626202 304.48.1.11 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.58 45.0 3.65e-01 90.4% 54.5%
3781863 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.57 40.0 2.54e-01 78.8% 14.8%
2721400 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 4.08e-01 90.4% 69.9%
3271803 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.57 46.0 3.88e-01 100.0% 58.1%
3838360 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.57 43.0 2.83e-01 88.5% 18.1%
5049563 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.57 45.0 2.66e-01 94.2% 11.1%
4561853 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.57 45.0 3.81e-01 100.0% 63.8%
4098754 2004.1.1.50 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin 0.56 43.0 2.95e-01 82.7% 38.5%
4014086 109.4.1.777 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 47.0 2.97e-01 100.0% 32.5%
3645693 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.56 47.0 3.91e-01 100.0% 67.0%
3171968 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 42.0 3.95e-01 86.5% 80.0%
3668147 387.1.5.1 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › Gamma-thionin 0.55 38.0 3.71e-01 75.0% 86.7%
5079048 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.54 42.0 4.06e-01 90.4% 80.0%
3921366 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 31.0 2.80e-01 90.4% 38.7%
3291480 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.53 38.0 3.35e-01 78.8% 83.5%
3620820 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.18e-01 94.2% 47.6%
3978019 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.53 40.0 3.63e-01 84.6% 76.0%
4004641 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.53 40.0 3.74e-01 88.5% 84.3%
3502250 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.53 41.0 3.50e-01 88.5% 62.1%
5054757 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.41e-01 100.0% 68.3%
4966124 101.1.2.924 alpha arrays › HTH › HTH › winged helix domain › DUF7342 0.53 39.0 2.98e-01 88.5% 37.4%
4933236 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.23e-01 86.5% 60.9%
4004341 101.1.2.775 alpha arrays › HTH › HTH › winged helix domain › SieB 0.52 43.0 3.81e-01 100.0% 70.6%
4133934 70.3.1.1 beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.52 42.0 2.81e-01 100.0% 57.2%
3516202 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.47e-01 92.3% 72.2%
3946321 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 4.04e-01 100.0% 80.0%
None 0.51 41.0 3.37e-01 96.2% 82.7%
D3 medium residues 186-306
PDB