←Back to structures
hypothetical_protein_A3303_gp352
Euk-VirBrazilian_marseillevirus
hypothetical_protein_A3303_gp352__YP_009238857__Brazilian_marseillevirus__1813599
Identity
- Accession:
- YP_009238857 ↗
- Protein ID:
- hypothetical_protein_A3303_gp352
- Kingdom:
- euk
Quality
68.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Brazilian_marseillevirus
TaxID: 1813599
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-79
D2
high
residues 113-179
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.68 | 38.0 | 3.95e-01 | 79.1% | 59.0% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.63 | 55.0 | 4.89e-01 | 100.0% | 89.9% |
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 52.0 | 4.36e-01 | 91.0% | 86.1% |
| 3t38A01 | 1.10.8.1060 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain | 0.62 | 40.0 | 3.93e-01 | 85.1% | 60.6% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 45.0 | 4.51e-01 | 100.0% | 77.6% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.60 | 44.0 | 3.85e-01 | 100.0% | 50.0% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 38.0 | 3.95e-01 | 100.0% | 69.8% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 42.0 | 4.19e-01 | 91.0% | 77.5% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 47.0 | 4.32e-01 | 100.0% | 72.4% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.55 | 42.0 | 3.18e-01 | 85.1% | 77.0% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.55 | 43.0 | 4.05e-01 | 100.0% | 71.2% |
| 6axgA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.54 | 35.0 | 3.18e-01 | 100.0% | 48.3% |
| 1ugoA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.54 | 37.0 | 3.39e-01 | 74.6% | 89.9% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.53 | 41.0 | 3.79e-01 | 100.0% | 63.0% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 45.0 | 3.90e-01 | 100.0% | 65.1% |
| 2klqA00 | 1.20.58.870 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.07e-01 | 100.0% | 44.7% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.50 | 34.0 | 3.41e-01 | 70.1% | 85.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022284 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.67 | 45.0 | 4.38e-01 | 70.1% | 72.0% |
| 3432185 | 101.11.1.2 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Ovate | 0.67 | 42.0 | 4.31e-01 | 97.0% | 66.2% |
| 2906440 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 45.0 | 4.39e-01 | 71.6% | 74.0% |
| 3413026 | 103.4.1.3 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_N | 0.65 | 39.0 | 3.86e-01 | 85.1% | 55.7% |
| 3832236 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.64 | 44.0 | 4.37e-01 | 100.0% | 68.6% |
| 3335640 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 41.0 | 4.21e-01 | 100.0% | 69.2% |
| 3376375 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.63 | 44.0 | 4.20e-01 | 95.5% | 62.5% |
| 4953551 | 4049.1.1.0 ↗ | alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like | 0.60 | 40.0 | 4.08e-01 | 70.1% | 83.1% |
| 5032855 | 179.1.1.0 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like | 0.59 | 33.0 | 3.54e-01 | 95.5% | 61.7% |
| 4107589 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.58 | 45.0 | 3.84e-01 | 100.0% | 50.4% |
| 3494078 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 36.0 | 3.65e-01 | 88.1% | 66.2% |
| 3318833 | 650.1.1.5 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › CPP1-like | 0.55 | 33.0 | 3.50e-01 | 97.0% | 66.7% |
| 3394510 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.54 | 36.0 | 3.50e-01 | 70.1% | 72.5% |
| 5046677 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 41.0 | 2.92e-01 | 80.6% | 37.9% |
| 3588719 | 564.1.1.0 ↗ | alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors | 0.54 | 35.0 | 3.59e-01 | 100.0% | 69.2% |
| 3401500 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.52 | 37.0 | 3.06e-01 | 77.6% | 47.9% |
| 3429276 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.52 | 33.0 | 3.48e-01 | 100.0% | 71.7% |