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hypothetical_protein_AP053_gp129

Euk-Vir

Ostreococcus_mediterraneus_virus_1

hypothetical_protein_AP053_gp129__YP_009172889__Ostreococcus_mediterraneus_virus_1__1663210

Identity

Accession:
YP_009172889 ↗
Protein ID:
hypothetical_protein_AP053_gp129
Kingdom:
euk

Quality

85.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-152
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19196.6 best DUF5871 180.8 1.60e-53 91.0% 87.6%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 45.0 5.10e-01 96.3% 78.4%
4jg2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 68.0 6.02e-01 97.0% 82.7%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 36.0 5.02e-01 94.8% 96.9%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 46.0 5.51e-01 98.5% 95.5%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 36.0 4.77e-01 92.5% 90.0%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 39.0 5.11e-01 95.5% 98.6%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 44.0 4.94e-01 96.3% 79.0%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 44.0 4.96e-01 95.5% 79.2%
2j4xA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 37.0 4.94e-01 94.8% 94.4%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 36.0 4.86e-01 95.5% 98.5%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 34.0 4.85e-01 94.0% 98.4%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 45.0 4.42e-01 100.0% 60.7%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 40.0 4.84e-01 95.5% 83.5%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 34.0 4.69e-01 94.0% 96.9%
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.69 38.0 5.12e-01 94.8% 100.0%
3k6oA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.69 37.0 4.93e-01 94.8% 97.3%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 33.0 4.63e-01 93.3% 100.0%
2asbA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 38.0 4.89e-01 92.5% 97.3%
2ahoB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 37.0 4.56e-01 94.0% 86.3%
6aqgA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 43.0 4.25e-01 100.0% 60.3%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 45.0 5.22e-01 94.8% 92.9%
3k0yA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.67 34.0 4.55e-01 94.0% 98.5%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 48.0 4.57e-01 100.0% 64.5%
2r61A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 37.0 4.74e-01 96.3% 100.0%
1fnuA01 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 39.0 4.83e-01 96.3% 98.8%
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 32.0 4.39e-01 91.0% 100.0%
1hh2P02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 32.0 4.37e-01 91.0% 100.0%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 41.0 4.43e-01 96.3% 76.7%
2b39A13 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 43.0 4.32e-01 97.0% 68.4%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 37.0 4.32e-01 96.3% 83.7%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 37.0 4.24e-01 95.5% 77.7%
3nswA00 2.40.50.780 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 37.0 4.06e-01 97.8% 72.6%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 37.0 4.41e-01 93.3% 94.3%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 38.0 4.50e-01 94.8% 98.9%
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 37.0 4.38e-01 94.0% 100.0%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 38.0 3.79e-01 100.0% 65.2%
4ifdI02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 40.0 3.95e-01 95.5% 68.8%
5j39A01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 41.0 4.22e-01 94.0% 79.4%
3lulA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.55 38.0 4.10e-01 99.3% 83.9%
4c3iG02 2.40.50.1060 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 34.0 3.38e-01 92.5% 58.3%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.52 36.0 3.15e-01 99.3% 48.2%
1s3rA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.51 16.0 2.50e-01 84.3% 66.0%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5064412 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.86 45.0 6.15e-01 92.5% 94.7%
4486408 2.1.1.326 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF5482 0.79 63.0 6.17e-01 100.0% 76.6%
4609000 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 39.0 5.41e-01 91.0% 100.0%
3578307 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 41.0 5.08e-01 97.8% 82.4%
4499457 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 47.0 5.74e-01 96.3% 92.2%
5025524 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 40.0 4.63e-01 94.8% 70.0%
4377694 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 50.0 6.04e-01 94.8% 100.0%
4626642 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 42.0 5.43e-01 95.5% 93.8%
4964437 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 44.0 5.30e-01 94.8% 87.8%
2759388 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 39.0 5.11e-01 95.5% 94.4%
4944356 2.1.1.357 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA-synt_2 0.72 45.0 5.13e-01 96.3% 83.0%
4947047 2.1.1.357 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA-synt_2 0.72 44.0 5.33e-01 96.3% 91.1%
4485046 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 45.0 4.34e-01 100.0% 56.7%
3624905 2.1.1.253 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.71 37.0 4.87e-01 94.0% 95.7%
5060970 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 43.0 4.60e-01 96.3% 68.3%
868431 2.18.1.1 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N 0.71 39.0 5.05e-01 100.0% 93.6%
4311381 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 45.0 4.44e-01 100.0% 60.0%
165635 2.2.1.1 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin 0.70 40.0 4.94e-01 100.0% 89.4%
4562380 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.70 44.0 4.06e-01 100.0% 50.9%
4374423 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.70 42.0 4.26e-01 100.0% 60.0%
3317544 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 34.0 4.66e-01 94.0% 95.4%
5082519 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 49.0 4.17e-01 100.0% 47.6%
3967657 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 43.0 5.15e-01 94.0% 94.4%
4952176 2.18.1.0 beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins 0.68 37.0 4.87e-01 94.8% 96.0%
3413155 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 36.0 4.56e-01 94.8% 89.3%
4349584 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.67 42.0 4.33e-01 100.0% 66.4%
3731566 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 61.0 5.45e-01 99.3% 90.7%
4026903 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 42.0 4.47e-01 96.3% 71.7%
3496962 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 39.0 4.61e-01 95.5% 86.7%
3938105 2.1.1.253 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.66 35.0 4.44e-01 95.5% 94.3%
3508632 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 35.0 4.45e-01 95.5% 92.0%
3958243 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 39.0 4.62e-01 94.8% 87.8%
3226474 2.1.1.253 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.65 35.0 4.50e-01 95.5% 93.3%
4062751 2.1.1.13 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.65 32.0 4.33e-01 94.8% 100.0%
5082488 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.65 41.0 4.50e-01 96.3% 77.3%
3473720 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.65 47.0 5.19e-01 97.8% 91.8%
5004339 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 49.0 4.52e-01 100.0% 63.1%
3518905 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 43.0 4.50e-01 97.8% 74.4%
5054824 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 40.0 4.35e-01 96.3% 74.8%
3588907 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 45.0 5.08e-01 97.0% 99.0%
2756306 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.61 40.0 4.47e-01 95.5% 86.4%
4945723 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 40.0 4.50e-01 95.5% 90.0%
3391480 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 51.0 5.31e-01 100.0% 100.0%
3603237 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 37.0 4.07e-01 96.3% 81.9%
3996398 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 32.0 3.98e-01 74.6% 88.2%
5024446 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.55 33.0 3.88e-01 91.8% 88.9%
3943885 2.1.1.167 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RseC_MucC 0.54 28.0 3.90e-01 77.6% 100.0%
3426514 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.53 36.0 4.06e-01 96.3% 92.0%
4676059 2.14.1.3 beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › RseC_MucC 0.53 29.0 3.73e-01 85.1% 100.0%
3998302 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.91e-01 99.3% 95.6%
2410012 237.1.1.2 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.51 30.0 2.72e-01 94.0% 40.5%
3243969 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 46.0 4.13e-01 96.3% 72.8%
3360309 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.51 37.0 4.14e-01 99.3% 100.0%
3407575 243.1.1.40 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.51 38.0 3.27e-01 78.4% 88.6%