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hypothetical_protein_AP053_gp130

Euk-Vir

Ostreococcus_mediterraneus_virus_1

hypothetical_protein_AP053_gp130__YP_009172890__Ostreococcus_mediterraneus_virus_1__1663210

Identity

Accession:: YP_009172890 ↗
Protein ID:: hypothetical_protein_AP053_gp130
Kingdom:: euk

Quality

74.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_mediterraneus_virus_1

TaxID: 1663210

Cluster

View cluster (9 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 348-454

PDB

D2 medium residues 1-80_144-233

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3rd4B00	2.40.50.660	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.59	22.0	3.10e-01	87.6%	65.9%
2ia7A00	3.10.450.40	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.57	35.0	4.25e-01	74.1%	94.6%
3htxA01	3.30.160.20	Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain ›	0.51	21.0	3.05e-01	90.6%	84.2%

D3 medium residues 81-143

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2yqrA01	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.61	50.0	4.26e-01	100.0%	55.3%
2il5A00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.59	52.0	3.89e-01	100.0%	39.5%
1e3hA03	3.30.230.70	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain	0.58	51.0	3.51e-01	96.8%	65.7%
6s2vC02	3.30.460.10	Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2	0.55	48.0	3.71e-01	100.0%	64.1%
5nckA01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.54	37.0	3.18e-01	95.2%	42.9%
1fm4A00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.53	38.0	3.00e-01	100.0%	32.1%
2wqlA00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.51	45.0	3.42e-01	98.4%	77.0%
2v0uA00	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.51	43.0	3.39e-01	98.4%	91.8%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3969662	5085.1.1.1 ↗	a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP	0.72	45.0	2.68e-01	100.0%	10.3%
3942885	316.1.1.48 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MdcG	0.68	51.0	4.25e-01	96.8%	46.4%
5057619	2004.1.2.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › PEP carboxykinase catalytic C-terminal domain	0.56	49.0	3.34e-01	100.0%	98.7%
3634542	4099.1.1.0 ↗	a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like	0.54	41.0	3.23e-01	100.0%	35.2%
3652887	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.53	46.0	3.49e-01	100.0%	49.0%
4477848	3068.2.1.1 ↗	a+b complex topology › Flagellar protein FlgA N-terminal domain-like › RNase J C-terminal domain › RNase J C-terminal domain › RNase_J_C	0.51	41.0	3.40e-01	95.2%	50.0%
3962036	324.1.1.1 ↗	a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC	0.51	43.0	3.59e-01	100.0%	53.3%
5050743	324.1.1.1 ↗	a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC	0.51	42.0	3.32e-01	100.0%	52.3%
3499681	292.2.1.1 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box	0.51	44.0	3.90e-01	100.0%	66.7%
3693104	7564.1.1.1 ↗	a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein	0.51	41.0	2.98e-01	95.2%	94.3%

D4 medium residues 282-347

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4l7nA01	1.20.142.10	Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain	0.52	36.0	2.88e-01	74.2%	36.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3401157	5054.1.1.0 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels	0.60	41.0	3.24e-01	71.2%	45.7%
3223919	4202.1.1.0 ↗	alpha duplicates or obligate multimers › Hermes dimerisation domain › Hermes dimerisation domain › Hermes dimerisation domain	0.52	31.0	3.08e-01	72.7%	54.3%