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hypothetical_protein_AP053_gp147
Euk-VirOstreococcus_mediterraneus_virus_1
hypothetical_protein_AP053_gp147__YP_009172907__Ostreococcus_mediterraneus_virus_1__1663210
Identity
- Accession:
- YP_009172907 ↗
- Protein ID:
- hypothetical_protein_AP053_gp147
- Kingdom:
- euk
Quality
76.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_mediterraneus_virus_1
TaxID: 1663210
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-175
Domain cluster:
rep: JQ067093.2__ALH23509.1__PaMx74_36__00036__D1104-1231
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22633.4 best | F5_F8_type_C_2 | 32.7 | 1.30e-07 | 59.5% | 64.4% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zxeC00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.84 | 66.0 | 6.42e-01 | 81.0% | 75.7% |
| 4ay0B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 37.0 | 4.48e-01 | 97.6% | 84.1% |
| 1u2hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 36.0 | 4.09e-01 | 96.0% | 69.8% |
| 2zf9A00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 47.0 | 4.23e-01 | 83.3% | 79.3% |
| 1o4yA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 46.0 | 3.66e-01 | 81.7% | 66.3% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 47.0 | 4.38e-01 | 82.5% | 67.7% |
| 2xwxA03 | 2.60.40.2550 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 38.0 | 4.22e-01 | 100.0% | 82.7% |
| 2erfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 44.0 | 3.72e-01 | 81.0% | 64.1% |
| 3kptA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 4.40e-01 | 84.1% | 89.4% |
| 1xedC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 36.0 | 3.94e-01 | 96.0% | 76.2% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 4.29e-01 | 76.2% | 83.3% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 32.0 | 3.58e-01 | 96.8% | 71.9% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.78e-01 | 81.0% | 68.4% |
| 3isrA02 | 2.60.40.2250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 40.0 | 4.45e-01 | 84.1% | 95.0% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.56 | 31.0 | 3.94e-01 | 94.4% | 92.1% |
| 1bq5A02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 37.0 | 3.44e-01 | 100.0% | 51.5% |
| 3afgA03 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 40.0 | 4.35e-01 | 80.2% | 93.1% |
| 1j1tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 44.0 | 3.65e-01 | 85.7% | 68.4% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.55 | 42.0 | 4.42e-01 | 100.0% | 91.8% |
| 4fgmA01 | 2.60.40.3650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 49.0 | 4.43e-01 | 100.0% | 93.6% |
| 2kzbA00 | 2.60.40.2830 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 4.17e-01 | 96.8% | 86.0% |
| 2ybyA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.54 | 26.0 | 3.26e-01 | 100.0% | 80.0% |
| 3g5wA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 37.0 | 3.45e-01 | 100.0% | 55.8% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 3.88e-01 | 97.6% | 81.6% |
| 4ofyD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.67e-01 | 96.0% | 78.6% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.52 | 41.0 | 4.04e-01 | 88.9% | 77.1% |
| 2ylkA00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.51 | 46.0 | 4.40e-01 | 98.4% | 91.0% |
| 7lvzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 42.0 | 3.52e-01 | 90.5% | 73.2% |
| 1jv2A04 | 2.60.40.1530 | Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 4 | 0.50 | 43.0 | 3.83e-01 | 96.0% | 75.5% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3904915 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.83 | 78.0 | 6.97e-01 | 100.0% | 92.4% |
| 3934331 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.82 | 77.0 | 7.04e-01 | 100.0% | 91.3% |
| 3219798 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.81 | 76.0 | 6.98e-01 | 100.0% | 89.4% |
| 3748870 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.81 | 76.0 | 6.93e-01 | 100.0% | 96.9% |
| 3568440 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.81 | 75.0 | 6.90e-01 | 100.0% | 96.9% |
| 3235471 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.81 | 75.0 | 7.08e-01 | 100.0% | 98.0% |
| 3575575 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.81 | 76.0 | 6.68e-01 | 100.0% | 90.3% |
| 3715994 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.81 | 75.0 | 6.37e-01 | 100.0% | 92.5% |
| 3699596 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.78 | 72.0 | 6.25e-01 | 100.0% | 98.9% |
| 4271594 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.68 | 62.0 | 5.66e-01 | 98.4% | 88.5% |
| 4477417 | 10.32.1.208 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Cleaved_Adhesin | 0.63 | 48.0 | 4.26e-01 | 81.0% | 78.9% |
| 4611950 | 10.37.1.1 ↗ | beta sandwiches › jelly-roll › TerD › TerD › TerD | 0.62 | 57.0 | 4.92e-01 | 100.0% | 76.8% |
| 3493837 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.62 | 53.0 | 5.34e-01 | 98.4% | 93.6% |
| 3525475 | 10.32.1.207 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1-like_3rd | 0.62 | 46.0 | 4.33e-01 | 78.6% | 75.5% |
| 3489254 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.61 | 52.0 | 4.57e-01 | 96.8% | 62.7% |
| 3966267 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.60 | 33.0 | 4.17e-01 | 100.0% | 90.7% |
| 4112241 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.60 | 33.0 | 3.99e-01 | 100.0% | 81.2% |
| 3979565 | 4959.1.1.0 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit | 0.59 | 32.0 | 4.15e-01 | 100.0% | 90.7% |
| 4338367 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 32.0 | 4.09e-01 | 100.0% | 89.3% |
| 4886558 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.59 | 32.0 | 4.14e-01 | 100.0% | 90.7% |
| 3165405 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.59 | 32.0 | 3.90e-01 | 100.0% | 80.0% |
| 4367226 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 32.0 | 3.90e-01 | 100.0% | 80.0% |
| 4385134 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 32.0 | 4.12e-01 | 100.0% | 90.7% |
| 4338722 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 32.0 | 4.11e-01 | 100.0% | 90.7% |
| 4477722 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 32.0 | 3.88e-01 | 100.0% | 80.0% |
| 3709448 | 10.37.1.0 ↗ | beta sandwiches › jelly-roll › TerD › TerD | 0.58 | 52.0 | 4.39e-01 | 100.0% | 81.4% |
| 4111791 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 32.0 | 3.94e-01 | 100.0% | 85.0% |
| 4360692 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 32.0 | 3.93e-01 | 100.0% | 85.0% |
| 4036893 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 32.0 | 3.92e-01 | 100.0% | 85.0% |
| 4307548 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 32.0 | 3.81e-01 | 100.0% | 80.0% |
| 3882742 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.58 | 44.0 | 3.56e-01 | 79.4% | 57.9% |
| 3598303 | 10.34.1.0 ↗ | beta sandwiches › jelly-roll › Protein CLP1 jelly-roll domain › Protein CLP1 jelly-roll domain | 0.58 | 38.0 | 4.30e-01 | 87.3% | 89.5% |
| 3385762 | 4951.1.1.0 ↗ | alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit | 0.58 | 33.0 | 4.10e-01 | 100.0% | 90.0% |
| 1087 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.57 | 44.0 | 3.72e-01 | 81.0% | 63.6% |
| 3477070 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.56 | 46.0 | 3.84e-01 | 87.3% | 59.1% |
| 4024732 | 295.1.1.40 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › Microp_apicomplexa_10 | 0.56 | 22.0 | 2.80e-01 | 99.2% | 58.7% |
| 5033863 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 45.0 | 4.27e-01 | 84.1% | 73.1% |
| 4600292 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.55 | 41.0 | 3.48e-01 | 77.8% | 62.0% |
| 3234374 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 34.0 | 3.64e-01 | 95.2% | 70.9% |
| 4954386 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 47.0 | 4.31e-01 | 96.0% | 78.2% |
| 3476987 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 41.0 | 3.48e-01 | 81.7% | 60.9% |
| 3475230 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.53 | 43.0 | 3.61e-01 | 88.1% | 67.1% |
| 3493000 | 389.1.2.1 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi | 0.53 | 35.0 | 4.05e-01 | 96.8% | 97.6% |
| 3603390 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.87e-01 | 96.0% | 96.5% |
| 4650155 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 38.0 | 3.94e-01 | 77.0% | 99.1% |
| 3333811 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 45.0 | 3.76e-01 | 97.6% | 74.1% |
| 5036049 | 325.1.5.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal protein L10e › Ribosomal_L16 | 0.50 | 39.0 | 3.68e-01 | 82.5% | 78.7% |
D2
high
residues 205-281
Domain cluster:
rep: putative_membrane_protein__YP_002296159__Emiliania_huxleyi_virus_86__181082__D51-124
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5eokA02 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.71 | 59.0 | 5.61e-01 | 93.5% | 76.7% |
| 5eokA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.70 | 58.0 | 5.52e-01 | 93.5% | 77.5% |
| 4apmA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.69 | 57.0 | 5.16e-01 | 98.7% | 66.0% |
| 5eokA03 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.68 | 57.0 | 5.25e-01 | 93.5% | 72.2% |
| 5eokA04 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.66 | 56.0 | 5.44e-01 | 93.5% | 84.3% |
| 3iylW01 | 3.90.1810.10 | Alpha Beta › Alpha-Beta Complex › Reovirus components fold › Reovirus components | 0.63 | 54.0 | 3.52e-01 | 100.0% | 27.1% |
| 1wdjA00 | 3.90.1570.10 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A | 0.60 | 44.0 | 3.44e-01 | 81.8% | 73.1% |
| 4bluB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 47.0 | 3.33e-01 | 94.8% | 31.9% |
| 2kvkA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 46.0 | 3.81e-01 | 89.6% | 83.3% |
| 3jvvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.57 | 43.0 | 3.97e-01 | 80.5% | 100.0% |
| 4f7oA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 45.0 | 3.29e-01 | 89.6% | 40.0% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.56 | 42.0 | 3.05e-01 | 83.1% | 79.3% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.55 | 35.0 | 3.50e-01 | 88.3% | 60.2% |
| 3ethA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 33.0 | 3.58e-01 | 93.5% | 72.6% |
| 5xyjA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 39.0 | 3.07e-01 | 87.0% | 36.3% |
| 1qm9A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 43.0 | 4.02e-01 | 89.6% | 95.9% |
| 4mamA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 33.0 | 3.28e-01 | 93.5% | 56.8% |
| 4jpqA00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 36.0 | 2.65e-01 | 74.0% | 53.0% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 38.0 | 3.56e-01 | 80.5% | 100.0% |
| 2dwcB02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 29.0 | 3.17e-01 | 93.5% | 67.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4003445 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.80 | 49.0 | 5.32e-01 | 92.2% | 73.8% |
| 3243609 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.72 | 53.0 | 5.40e-01 | 98.7% | 80.0% |
| 3428264 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.71 | 57.0 | 5.55e-01 | 93.5% | 78.8% |
| 3457974 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.68 | 56.0 | 5.47e-01 | 92.2% | 82.1% |
| 3270579 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.68 | 58.0 | 5.26e-01 | 90.9% | 84.0% |
| 3426846 | 390.1.1.6 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 | 0.67 | 58.0 | 5.40e-01 | 94.8% | 76.8% |
| 3502011 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.67 | 54.0 | 5.22e-01 | 92.2% | 78.8% |
| 3184616 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.67 | 55.0 | 5.12e-01 | 88.3% | 85.1% |
| 3909665 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.67 | 56.0 | 5.22e-01 | 90.9% | 80.0% |
| 3997243 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.66 | 48.0 | 4.81e-01 | 90.9% | 75.0% |
| 3689033 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.65 | 55.0 | 5.14e-01 | 90.9% | 81.1% |
| 1877444 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.65 | 56.0 | 5.19e-01 | 92.2% | 82.1% |
| 3799573 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.65 | 57.0 | 4.95e-01 | 98.7% | 64.3% |
| 3236985 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.64 | 54.0 | 5.12e-01 | 90.9% | 86.7% |
| 3992651 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.64 | 51.0 | 4.99e-01 | 92.2% | 77.6% |
| 3540498 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.63 | 54.0 | 5.09e-01 | 92.2% | 85.6% |
| 4020600 | 390.1.1.2 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › WSC | 0.62 | 54.0 | 5.07e-01 | 94.8% | 82.1% |
| 3795857 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.62 | 50.0 | 4.91e-01 | 92.2% | 79.5% |
| 3992652 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.61 | 52.0 | 5.07e-01 | 92.2% | 82.4% |
| 3506588 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.61 | 52.0 | 4.71e-01 | 92.2% | 70.7% |
| 3626443 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.59 | 50.0 | 4.75e-01 | 92.2% | 77.8% |
| 3506575 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.59 | 50.0 | 4.67e-01 | 92.2% | 73.7% |
| 3795859 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.58 | 49.0 | 4.70e-01 | 92.2% | 81.1% |
| 4463007 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.57 | 35.0 | 3.61e-01 | 93.5% | 61.3% |
| 3687435 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 43.0 | 3.48e-01 | 87.0% | 66.7% |
| 3302709 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 47.0 | 4.04e-01 | 97.4% | 95.4% |
| 4013664 | 224.1.1.0 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like | 0.55 | 43.0 | 3.65e-01 | 88.3% | 94.3% |
| 4982409 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.54 | 37.0 | 2.94e-01 | 74.0% | 87.7% |
| 3424803 | 10.10.1.4 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › ATS3 | 0.52 | 32.0 | 2.84e-01 | 92.2% | 40.0% |