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hypothetical_protein_AP053_gp189

Euk-Vir

Ostreococcus_mediterraneus_virus_1

hypothetical_protein_AP053_gp189__YP_009173005__Ostreococcus_mediterraneus_virus_1__1663210

Identity

Accession:: YP_009173005 ↗
Protein ID:: hypothetical_protein_AP053_gp189
Kingdom:: euk

Quality

73.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_mediterraneus_virus_1

TaxID: 1663210

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 104-190

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4hteA01	1.20.58.1730	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.68	44.0	3.65e-01	94.3%	39.9%
2zgyA02	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.60	46.0	3.98e-01	82.8%	72.1%
5zzjA02	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.58	41.0	2.79e-01	72.4%	54.9%
2yqzA02	1.10.8.900	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.56	38.0	4.25e-01	74.7%	91.2%
1wcrA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.55	42.0	3.96e-01	80.5%	94.2%
3f7cA00	1.20.1590.10	Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like	0.52	39.0	3.07e-01	80.5%	62.8%
4hstB03	1.10.1400.10	Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region	0.52	37.0	3.21e-01	79.3%	49.6%
3tf8B00	3.90.1520.10	Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain	0.51	38.0	3.09e-01	81.6%	98.4%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3990854	192.7.1.0 ↗	alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm	0.77	50.0	5.02e-01	100.0%	64.4%
4038742	150.5.1.53 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE	0.70	45.0	4.36e-01	93.1%	60.0%
4354474	101.1.2.598 ↗	alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD	0.68	47.0	2.94e-01	90.8%	13.7%
3724928	192.8.1.35 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF6594	0.64	48.0	4.50e-01	85.1%	65.7%
4018370	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.62	53.0	4.57e-01	98.9%	60.8%
3353121	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.61	44.0	3.55e-01	74.7%	48.5%
4942625	5058.1.1.16 ↗	alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1	0.60	40.0	4.16e-01	80.5%	73.8%
3506533	3684.1.1.0 ↗	alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like	0.59	49.0	3.86e-01	90.8%	44.0%
3466041	2006.1.4.37 ↗	a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › UVB_sens_C	0.57	43.0	3.46e-01	78.2%	69.0%
2323994	604.37.1.0 ↗	alpha bundles › Spectrin repeat-like › Legionella effector Lem22 › Legionella effector Lem22	0.55	46.0	4.54e-01	86.2%	93.3%
4022243	101.1.2.517 ↗	alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD	0.54	43.0	2.69e-01	86.2%	97.6%