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hypothetical_protein_AP053_gp196

Euk-Vir

Ostreococcus_mediterraneus_virus_1

hypothetical_protein_AP053_gp196__YP_009172998__Ostreococcus_mediterraneus_virus_1__1663210

Identity

Accession:
YP_009172998 ↗
Protein ID:
hypothetical_protein_AP053_gp196
Kingdom:
euk

Quality

70.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_mediterraneus_virus_1

TaxID: 1663210

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-165
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.69 44.0 5.30e-01 99.4% 99.0%
3t30C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.66 40.0 4.99e-01 100.0% 100.0%
2vm9A02 2.60.40.2080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 38.0 4.71e-01 100.0% 98.0%
6fxrA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.62 37.0 3.38e-01 98.7% 43.5%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.62 50.0 5.29e-01 100.0% 95.7%
4qkbA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.62 41.0 3.89e-01 100.0% 56.1%
1x9pA01 2.60.120.550 Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1 0.62 53.0 5.26e-01 99.4% 88.3%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.60 50.0 4.89e-01 100.0% 82.7%
3qvaA00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.59 30.0 3.47e-01 89.2% 66.1%
3kmhA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 40.0 3.55e-01 100.0% 49.1%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 54.0 4.49e-01 100.0% 66.9%
4uzgA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 31.0 3.49e-01 89.9% 65.3%
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 53.0 5.00e-01 100.0% 91.5%
3l5hA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 30.0 4.02e-01 79.1% 100.0%
1qhoA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 36.0 4.20e-01 75.3% 90.7%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.56 46.0 4.91e-01 99.4% 99.3%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 51.0 5.13e-01 99.4% 100.0%
7zscA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.56 39.0 3.48e-01 99.4% 50.2%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 4.86e-01 96.8% 100.0%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 4.72e-01 100.0% 99.2%
4f3jA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 4.65e-01 100.0% 94.4%
3uafA00 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 35.0 3.94e-01 72.8% 83.8%
3q2wA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.55 36.0 4.17e-01 94.9% 97.1%
3kptA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 30.0 3.55e-01 85.4% 76.4%
1etb200 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.55 30.0 3.40e-01 89.2% 69.2%
2xtlA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 29.0 3.25e-01 89.2% 63.3%
2h0eB00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.54 30.0 3.50e-01 89.2% 74.3%
3ks7A01 2.60.120.1570 Mainly Beta › Sandwich › Jelly Rolls › Peptide-N-glycosidase F, N-terminal domain 0.54 49.0 4.50e-01 100.0% 98.6%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.52e-01 100.0% 79.9%
1n12A00 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.54 44.0 4.71e-01 100.0% 100.0%
3napB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.19e-01 99.4% 68.4%
2ztnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 49.0 4.61e-01 100.0% 94.7%
1jmmA02 2.60.530.10 Mainly Beta › Sandwich › Major cell-surface adhesin PAc › Major cell-surface adhesin PAc 0.54 49.0 3.84e-01 100.0% 96.4%
3s7vC00 2.60.175.10 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus 0.53 48.0 4.08e-01 100.0% 96.6%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.37e-01 100.0% 73.4%
1f2nC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.39e-01 100.0% 82.5%
3zn4A00 2.60.120.1180 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 4.29e-01 88.0% 86.6%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.53e-01 100.0% 88.7%
5c8cB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 3.97e-01 100.0% 67.8%
1pgsA02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 4.72e-01 100.0% 94.9%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.08e-01 100.0% 76.9%
2izwC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 4.35e-01 100.0% 79.3%
1ti2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 28.0 3.72e-01 91.1% 96.4%
1r6vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 29.0 3.35e-01 88.6% 74.1%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 4.23e-01 100.0% 83.8%
4llfD01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 4.53e-01 100.0% 91.6%
5faaA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.64e-01 89.2% 79.7%
4qc8A00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.52 47.0 3.31e-01 100.0% 85.3%
2x12A01 2.60.40.2010 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 45.0 4.23e-01 94.3% 98.4%
2xetB00 2.60.40.2070 Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain 0.52 27.0 3.35e-01 74.1% 84.1%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.51 32.0 3.69e-01 96.8% 91.3%
2tbvA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 3.83e-01 100.0% 56.6%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 46.0 4.59e-01 100.0% 96.4%
3e8vA00 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.51 23.0 2.98e-01 88.6% 74.4%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3229302 10.33.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in minor capsid protein › Jelly-roll domain in minor capsid protein 0.70 58.0 6.17e-01 99.4% 99.3%
4990898 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 41.0 5.12e-01 98.1% 100.0%
3938564 385.1.1.2 ↗ few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta 0.66 54.0 4.38e-01 99.4% 47.4%
3933681 385.1.1.2 ↗ few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta 0.64 51.0 4.23e-01 99.4% 47.1%
5056896 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 46.0 5.23e-01 98.7% 100.0%
3250705 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.63 40.0 3.76e-01 100.0% 50.8%
1731080 10.2.1.21 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Ilar_coat 0.63 48.0 4.96e-01 100.0% 84.9%
4981390 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.62 24.0 3.06e-01 82.9% 57.8%
3932049 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.61 50.0 4.87e-01 99.4% 79.4%
3251492 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 56.0 4.91e-01 100.0% 80.4%
5018134 10.1.2.186 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 0.60 46.0 4.93e-01 100.0% 93.3%
3544039 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.60 45.0 3.51e-01 77.2% 65.7%
3396112 10.32.1.235 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.59 34.0 4.13e-01 100.0% 89.0%
3888291 11.2.1.19 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.59 44.0 3.65e-01 77.8% 67.9%
3364460 10.32.1.203 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.58 50.0 5.16e-01 98.7% 99.3%
3889463 10.32.1.225 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF31127 0.58 48.0 4.87e-01 99.4% 89.7%
3831284 207.1.1.465 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3, LRR_4 0.58 45.0 3.20e-01 94.3% 27.3%
3785143 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 52.0 5.07e-01 99.4% 100.0%
5060810 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 25.0 3.25e-01 89.9% 70.6%
4937807 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 42.0 4.16e-01 76.6% 95.9%
3802129 10.32.1.192 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.57 50.0 3.86e-01 95.6% 43.5%
3382082 207.1.1.37 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.57 52.0 3.88e-01 98.7% 44.7%
4135739 10.32.1.18 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.56 47.0 4.86e-01 100.0% 94.6%
5045925 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 31.0 3.86e-01 73.4% 91.1%
4945167 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 41.0 4.53e-01 100.0% 96.8%
3266246 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 41.0 4.42e-01 77.8% 97.8%
3858934 11.1.4.74 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › FAM171A1-2-B_N 0.55 30.0 3.81e-01 70.3% 91.1%
3825140 207.1.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 0.55 49.0 4.01e-01 95.6% 60.0%
4968966 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 40.0 4.41e-01 99.4% 95.2%
3580756 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.55 50.0 4.63e-01 100.0% 91.5%
3978758 10.4.1.42 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Ig_GpJ_C 0.54 42.0 4.56e-01 100.0% 99.2%
296002 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.54 48.0 4.51e-01 100.0% 79.9%
3826439 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 47.0 4.57e-01 94.9% 90.0%
3580431 11.2.1.58 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PF26186 0.54 47.0 4.27e-01 94.3% 86.7%
4949416 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 22.0 2.98e-01 89.2% 68.8%
5039694 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 49.0 4.84e-01 98.7% 99.4%
4970104 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 28.0 3.55e-01 71.5% 84.4%
146646 10.2.1.30 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 0.54 49.0 4.59e-01 100.0% 92.2%
3812200 10.32.1.38 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.53 48.0 4.28e-01 100.0% 87.0%
3935465 11.1.4.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.53 34.0 3.94e-01 72.2% 91.8%
3789009 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 39.0 4.15e-01 76.6% 89.3%
1180 10.2.1.47 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › N-glycanase_C 0.53 49.0 4.73e-01 100.0% 94.8%
3482654 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 48.0 4.63e-01 100.0% 89.4%
3307728 10.32.1.192 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.53 43.0 4.29e-01 96.8% 84.4%
3685844 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 39.0 4.11e-01 76.6% 90.0%
4982441 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 28.0 3.65e-01 70.3% 94.1%
3509471 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 35.0 4.13e-01 75.3% 100.0%
3616028 11.1.4.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.53 31.0 3.70e-01 75.3% 86.7%
3996048 11.1.1.161 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TPPII 0.53 39.0 4.39e-01 93.7% 100.0%
3874421 10.3.1.2 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.52 42.0 4.43e-01 100.0% 97.1%
3248609 11.32.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Calcium-dependent cell adhesion molecule-1 C-terminal domain › Calcium-dependent cell adhesion molecule-1 C-terminal domain › Membrane_bind 0.52 35.0 4.06e-01 72.2% 93.9%
5051137 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 46.0 4.52e-01 96.8% 100.0%
423236 10.2.1.6 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Polyoma_coat 0.52 48.0 4.03e-01 100.0% 96.2%
3927863 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 28.0 3.51e-01 75.3% 90.6%
3451979 11.1.4.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7152 0.52 30.0 3.57e-01 94.9% 86.0%
3219959 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 46.0 4.44e-01 98.1% 98.4%
3885639 10.2.1.47 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › N-glycanase_C 0.52 47.0 4.72e-01 99.4% 99.4%
3269322 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 45.0 4.43e-01 98.1% 87.6%
3302977 207.1.1.37 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.52 45.0 3.51e-01 94.3% 44.2%
4989279 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 29.0 3.59e-01 93.0% 93.3%
3616171 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 28.0 3.37e-01 71.5% 83.2%
3380052 10.9.1.1 ↗ beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV 0.51 43.0 4.25e-01 91.8% 85.9%
4944854 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 46.0 4.45e-01 98.1% 98.3%
3511520 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 45.0 4.30e-01 98.1% 97.8%