hypothetical_protein_AP054_gp047

Euk-Vir

Ostreococcus_lucimarinus_virus_7

hypothetical_protein_AP054_gp047__YP_009173059__Ostreococcus_lucimarinus_virus_7__1663209

Identity

55.7 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_7

TaxID: 1663209

View cluster (7 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 176-238

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19082.6 best	DUF5773	88.9	6.60e-25	98.4%	35.6%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ihjA02	1.10.287.1970	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.65	38.0	4.45e-01	93.7%	94.7%
1q8dA00	1.10.220.110	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › GDNF binding domain	0.57	40.0	3.60e-01	77.8%	77.0%
6srbA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.57	45.0	3.80e-01	88.9%	74.3%
1eljA02	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.53	37.0	2.75e-01	74.6%	67.9%
4olsA00	3.40.80.10	Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like	0.51	43.0	3.22e-01	100.0%	72.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3958744	604.24.1.1 ↗	alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C	0.54	41.0	3.68e-01	88.9%	97.0%
3722031	3985.1.1.1 ↗	alpha bundles › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM	0.51	35.0	3.40e-01	71.4%	77.3%

D2 medium residues 239-315

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19082.6 best	DUF5773	117.5	1.10e-33	100.0%	44.6%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1k99A00	1.10.30.10	Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain	0.55	34.0	3.31e-01	84.4%	52.7%
2m6uA00	1.20.81.20	Mainly Alpha › Up-down Bundle › Receptor-associated Protein ›	0.53	39.0	3.82e-01	88.3%	72.0%
2om6A02	1.10.150.400	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.50	37.0	3.77e-01	93.5%	79.7%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4991136	4009.1.1.0 ↗	alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins	0.58	38.0	4.17e-01	77.9%	85.0%
3524167	904.1.1.1 ↗	few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box	0.54	30.0	2.30e-01	70.1%	20.5%
3641811	632.7.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain	0.53	37.0	3.56e-01	74.0%	75.6%
3814617	190.1.1.1 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box	0.52	33.0	3.47e-01	85.7%	70.0%
5043629	601.7.1.34 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129	0.51	35.0	3.47e-01	72.7%	88.1%
3620999	5059.1.1.5 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA	0.51	37.0	2.51e-01	77.9%	71.1%