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hypothetical_protein_AP054_gp075

Euk-Vir

Ostreococcus_lucimarinus_virus_7

hypothetical_protein_AP054_gp075__YP_009173087__Ostreococcus_lucimarinus_virus_7__1663209

Identity

Accession:
YP_009173087 ↗
Protein ID:
hypothetical_protein_AP054_gp075
Kingdom:
euk

Quality

61.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_7

TaxID: 1663209

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-89
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3craB01 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.83 57.0 4.67e-01 72.0% 57.0%
2yinA01 1.25.40.410 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A 0.81 73.0 5.36e-01 100.0% 46.1%
4k51B00 1.25.40.860 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.81 72.0 5.01e-01 100.0% 45.9%
6fbtA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.80 63.0 5.39e-01 84.0% 71.1%
3hqiA02 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.76 59.0 4.16e-01 82.0% 37.9%
4nrhB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 65.0 4.35e-01 94.0% 32.4%
3lcvB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.73 63.0 4.14e-01 96.0% 37.1%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.73 59.0 4.43e-01 86.0% 58.0%
2ynqB00 1.25.40.680 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain 0.73 64.0 4.55e-01 100.0% 40.4%
5m72A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.72 65.0 4.57e-01 100.0% 53.3%
1yvwA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.71 62.0 4.93e-01 94.0% 64.1%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 63.0 5.47e-01 98.0% 84.0%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 61.0 4.92e-01 96.0% 81.7%
1owlA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.70 57.0 4.29e-01 92.0% 61.0%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 59.0 5.38e-01 90.0% 84.1%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.69 49.0 3.69e-01 76.0% 69.4%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 61.0 4.12e-01 100.0% 62.4%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 54.0 5.10e-01 94.0% 82.3%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.64 43.0 3.15e-01 70.0% 25.4%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.63 49.0 3.58e-01 86.0% 50.4%
6axfA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.63 49.0 3.87e-01 92.0% 80.3%
1l8qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 41.0 2.97e-01 94.0% 33.9%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3427197 3718.1.1.0 ↗ alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT 0.81 70.0 5.92e-01 100.0% 61.2%
3286574 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.80 73.0 4.43e-01 100.0% 31.2%
3254748 109.4.1.198 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.79 70.0 4.70e-01 100.0% 29.7%
3995784 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.78 59.0 4.31e-01 82.0% 40.8%
4400977 604.34.1.0 ↗ alpha bundles › Spectrin repeat-like › Helical bundle domain in arginine decarboxylase › Helical bundle domain in arginine decarboxylase 0.78 67.0 5.54e-01 94.0% 74.1%
3963715 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 68.0 5.39e-01 98.0% 85.3%
3576590 109.27.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK 0.76 57.0 3.69e-01 80.0% 26.2%
3464862 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 68.0 4.33e-01 100.0% 51.3%
3773938 109.27.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.75 59.0 5.52e-01 84.0% 93.3%
3994400 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.74 57.0 3.89e-01 82.0% 33.1%
3932069 604.12.1.1 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.73 65.0 5.60e-01 96.0% 85.3%
3291199 109.4.1.45 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BTAD 0.73 66.0 4.59e-01 100.0% 64.4%
3446444 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.73 58.0 3.53e-01 86.0% 18.0%
3236399 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.73 58.0 4.94e-01 86.0% 82.5%
3275377 109.27.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK 0.73 58.0 5.33e-01 86.0% 86.2%
3607987 109.4.1.2243 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF29386 0.72 61.0 3.92e-01 94.0% 23.9%
4160158 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.71 57.0 4.85e-01 88.0% 91.3%
4580956 2484.1.1.222 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236 0.70 56.0 3.65e-01 90.0% 20.4%
3623717 109.4.1.338 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 0.69 57.0 4.62e-01 92.0% 63.2%
3214939 226.1.1.1 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.69 54.0 3.79e-01 86.0% 32.3%
4284044 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 61.0 4.34e-01 100.0% 55.3%
3280116 109.4.1.212 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_20 0.68 61.0 4.41e-01 100.0% 77.1%
3989020 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.68 58.0 3.57e-01 96.0% 16.7%
3596045 604.9.1.0 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.66 56.0 4.77e-01 98.0% 74.1%
3467575 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.63 53.0 3.63e-01 98.0% 63.2%
3583865 101.3.1.0 ↗ alpha arrays › HTH › XPC-binding domain › XPC-binding domain 0.62 49.0 4.27e-01 86.0% 76.0%
4177727 4095.1.1.1 ↗ alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.60 46.0 3.61e-01 82.0% 38.2%
3752138 226.1.1.10 ↗ a+b two layers › POZ domain › POZ domain › POZ domain › KLHL33-like_BTB_POZ 0.53 45.0 3.86e-01 98.0% 60.0%