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hypothetical_protein_AP054_gp156

Euk-Vir

Ostreococcus_lucimarinus_virus_7

hypothetical_protein_AP054_gp156__YP_009173168__Ostreococcus_lucimarinus_virus_7__1663209

Identity

Accession:
YP_009173168 ↗
Protein ID:
hypothetical_protein_AP054_gp156
Kingdom:
euk

Quality

76.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D2 high residues 554-636
PDB
D3 medium residues 173-336
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08706.17 best D5_N 28.4 2.60e-06 88.4% 63.9%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.57 25.0 3.06e-01 86.0% 60.2%
2pjhB02 3.10.330.10 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.55 21.0 2.57e-01 84.8% 48.1%
3cetB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 21.0 2.51e-01 86.6% 50.0%
1vf7F01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.50 20.0 2.55e-01 72.6% 57.8%
D4 medium residues 337-369_502-553
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rtwB00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.54 44.0 3.36e-01 89.4% 74.0%
4xaxB02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.51 33.0 3.18e-01 75.3% 57.6%
3edvB01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 36.0 3.10e-01 75.3% 55.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3605301 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 2.73e-01 75.3% 48.8%
D5 medium residues 370-501
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 43.3 7.30e-11 84.1% 99.1%